Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003496A_C01 KMC003496A_c01
(631 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566101.1| expressed protein; protein id: At2g47450.1, sup... 174 1e-42
gb|AAK96775.1| Unknown protein [Arabidopsis thaliana] gi|2508423... 174 1e-42
gb|AAD01509.1| CAO [Arabidopsis thaliana] 174 1e-42
pir||T00439 hypothetical protein At2g47450 [imported] - Arabidop... 174 1e-42
gb|AAM22701.1|AC098693_6 Putative CAO protein [Oryza sativa (jap... 148 7e-35
>ref|NP_566101.1| expressed protein; protein id: At2g47450.1, supported by cDNA:
gi_15215824, supported by cDNA: gi_15451007, supported
by cDNA: gi_15982849 [Arabidopsis thaliana]
gi|15215825|gb|AAK91457.1| At2g47450/T30B22.25
[Arabidopsis thaliana] gi|15982850|gb|AAL09772.1|
At2g47450/T30B22.25 [Arabidopsis thaliana]
gi|20196959|gb|AAC62865.2| expressed protein
[Arabidopsis thaliana] gi|22137050|gb|AAM91370.1|
At2g47450/T30B22.25 [Arabidopsis thaliana]
Length = 373
Score = 174 bits (440), Expect = 1e-42
Identities = 81/120 (67%), Positives = 100/120 (82%), Gaps = 1/120 (0%)
Frame = -1
Query: 631 QFGRRVGLEGVVRVLEGAVFEYAEVEEILERRGKGENLEYLVRWKDGGGNEWVNARFVAE 452
QFGRR+GLE V+ VLEG VFEYAEV+EI+E+RGKG+++EYLVRWKDGG EWV VAE
Sbjct: 248 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 307
Query: 451 DLVRDYEAGLEYAVAEAVVGRRVGDEGK-LELLVKWVDLEQPTWEPEENVDPELVKLYEQ 275
D+ +DYE GLEYAVAE+V+G+RVGD+GK +E LVKW D+ TWEP++NVD LV LY+Q
Sbjct: 308 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 367
Score = 47.8 bits (112), Expect = 1e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -1
Query: 568 YAEVEEILERRGKGEN-LEYLVRWKDGGGNEWVNARFVAEDLVRDYE 431
Y EV +I+ R GE +EYL+ WKDG WV + ++A D+V +YE
Sbjct: 83 YGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 129
Score = 44.3 bits (103), Expect = 0.001
Identities = 18/59 (30%), Positives = 29/59 (48%)
Frame = -1
Query: 454 EDLVRDYEAGLEYAVAEAVVGRRVGDEGKLELLVKWVDLEQPTWEPEENVDPELVKLYE 278
E+ D E+ Y ++G R EG +E L++W D P+W P + ++V YE
Sbjct: 71 EEAEEDDESSSSYGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 129
>gb|AAK96775.1| Unknown protein [Arabidopsis thaliana] gi|25084231|gb|AAN72202.1|
Unknown protein [Arabidopsis thaliana]
Length = 373
Score = 174 bits (440), Expect = 1e-42
Identities = 81/120 (67%), Positives = 100/120 (82%), Gaps = 1/120 (0%)
Frame = -1
Query: 631 QFGRRVGLEGVVRVLEGAVFEYAEVEEILERRGKGENLEYLVRWKDGGGNEWVNARFVAE 452
QFGRR+GLE V+ VLEG VFEYAEV+EI+E+RGKG+++EYLVRWKDGG EWV VAE
Sbjct: 248 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 307
Query: 451 DLVRDYEAGLEYAVAEAVVGRRVGDEGK-LELLVKWVDLEQPTWEPEENVDPELVKLYEQ 275
D+ +DYE GLEYAVAE+V+G+RVGD+GK +E LVKW D+ TWEP++NVD LV LY+Q
Sbjct: 308 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 367
Score = 47.8 bits (112), Expect = 1e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -1
Query: 568 YAEVEEILERRGKGEN-LEYLVRWKDGGGNEWVNARFVAEDLVRDYE 431
Y EV +I+ R GE +EYL+ WKDG WV + ++A D+V +YE
Sbjct: 83 YGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 129
Score = 45.1 bits (105), Expect = 8e-04
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 454 EDLVRDYEAGLEYAVAEAVVGRRVGDEGKLELLVKWVDLEQPTWEPEENVDPELVKLYE 278
E++ D E+ Y ++G R EG +E L++W D P+W P + ++V YE
Sbjct: 71 EEVEEDDESSSSYGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 129
>gb|AAD01509.1| CAO [Arabidopsis thaliana]
Length = 376
Score = 174 bits (440), Expect = 1e-42
Identities = 81/120 (67%), Positives = 100/120 (82%), Gaps = 1/120 (0%)
Frame = -1
Query: 631 QFGRRVGLEGVVRVLEGAVFEYAEVEEILERRGKGENLEYLVRWKDGGGNEWVNARFVAE 452
QFGRR+GLE V+ VLEG VFEYAEV+EI+E+RGKG+++EYLVRWKDGG EWV VAE
Sbjct: 251 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 310
Query: 451 DLVRDYEAGLEYAVAEAVVGRRVGDEGK-LELLVKWVDLEQPTWEPEENVDPELVKLYEQ 275
D+ +DYE GLEYAVAE+V+G+RVGD+GK +E LVKW D+ TWEP++NVD LV LY+Q
Sbjct: 311 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 370
Score = 47.8 bits (112), Expect = 1e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -1
Query: 568 YAEVEEILERRGKGEN-LEYLVRWKDGGGNEWVNARFVAEDLVRDYE 431
Y EV +I+ R GE +EYL+ WKDG WV + ++A D+V +YE
Sbjct: 86 YGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 132
Score = 44.3 bits (103), Expect = 0.001
Identities = 18/59 (30%), Positives = 29/59 (48%)
Frame = -1
Query: 454 EDLVRDYEAGLEYAVAEAVVGRRVGDEGKLELLVKWVDLEQPTWEPEENVDPELVKLYE 278
E+ D E+ Y ++G R EG +E L++W D P+W P + ++V YE
Sbjct: 74 EEAEEDDESSSSYGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 132
>pir||T00439 hypothetical protein At2g47450 [imported] - Arabidopsis thaliana
Length = 366
Score = 174 bits (440), Expect = 1e-42
Identities = 81/120 (67%), Positives = 100/120 (82%), Gaps = 1/120 (0%)
Frame = -1
Query: 631 QFGRRVGLEGVVRVLEGAVFEYAEVEEILERRGKGENLEYLVRWKDGGGNEWVNARFVAE 452
QFGRR+GLE V+ VLEG VFEYAEV+EI+E+RGKG+++EYLVRWKDGG EWV VAE
Sbjct: 241 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 300
Query: 451 DLVRDYEAGLEYAVAEAVVGRRVGDEGK-LELLVKWVDLEQPTWEPEENVDPELVKLYEQ 275
D+ +DYE GLEYAVAE+V+G+RVGD+GK +E LVKW D+ TWEP++NVD LV LY+Q
Sbjct: 301 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 360
Score = 47.8 bits (112), Expect = 1e-04
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -1
Query: 568 YAEVEEILERRGKGEN-LEYLVRWKDGGGNEWVNARFVAEDLVRDYE 431
Y EV +I+ R GE +EYL+ WKDG WV + ++A D+V +YE
Sbjct: 76 YGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 122
Score = 44.3 bits (103), Expect = 0.001
Identities = 18/59 (30%), Positives = 29/59 (48%)
Frame = -1
Query: 454 EDLVRDYEAGLEYAVAEAVVGRRVGDEGKLELLVKWVDLEQPTWEPEENVDPELVKLYE 278
E+ D E+ Y ++G R EG +E L++W D P+W P + ++V YE
Sbjct: 64 EEAEEDDESSSSYGEVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE 122
>gb|AAM22701.1|AC098693_6 Putative CAO protein [Oryza sativa (japonica cultivar-group)]
Length = 388
Score = 148 bits (373), Expect = 7e-35
Identities = 72/132 (54%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Frame = -1
Query: 628 FGRRVGLEGVVRVLEGAVFEYAEVEEILERRGKGENLEYLVRWKDGGGNEWVNARFVAED 449
F RR+ LE + LE AV+E+ EVE++++ RG+G+ EYLV W+DGG EWV A +VAED
Sbjct: 250 FERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWRDGGDREWVRAAWVAED 309
Query: 448 LVRDYEAGLEYAVAEAVVGRR--VGDEGKLELLVKWVDLEQPTWEPEENVDPELVKLYEQ 275
LV+D++AGLEYAVAEAVV +R EGK E LVKWVD+E+ TWEP ENVD EL++ +EQ
Sbjct: 310 LVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATWEPAENVDAELLQEFEQ 369
Query: 274 SNNQAQPSSNGP 239
+ + P
Sbjct: 370 RQSGVAAGGDAP 381
Score = 37.7 bits (86), Expect = 0.13
Identities = 15/29 (51%), Positives = 19/29 (64%)
Frame = -1
Query: 517 EYLVRWKDGGGNEWVNARFVAEDLVRDYE 431
EYLV WKDG W+ A +A D+V +YE
Sbjct: 97 EYLVEWKDGHEPSWIPAEAIAADVVAEYE 125
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 675,192,354
Number of Sequences: 1393205
Number of extensions: 21443003
Number of successful extensions: 579264
Number of sequences better than 10.0: 13554
Number of HSP's better than 10.0 without gapping: 121824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299758
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
