Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003462A_C01 KMC003462A_c01
(552 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P51138|MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 gi... 133 2e-30
sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 132 3e-30
pir||S37642 protein kinase MSK-3 (EC 2.7.1.-) [similarity] - alf... 132 3e-30
emb|CAA10288.1| protein kinase [Cicer arietinum] 125 3e-28
gb|AAM77397.1| GSK-like kinase [Triticum aestivum] 119 2e-26
>sp|P51138|MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 gi|481019|pir||S37643
protein kinase MSK-2 (EC 2.7.1.-) [similarity] - alfalfa
gi|313146|emb|CAA48473.1| protein kinase [Medicago
sativa]
Length = 411
Score = 133 bits (334), Expect = 2e-30
Identities = 62/70 (88%), Positives = 65/70 (92%)
Frame = -1
Query: 552 YSPNLRCTALEAXVHPFFDELRDPNTHLPNGRFLPPLFNFKANELRGVPAEMLVKLIPSH 373
YSPNLR TALEA VHPFFDELRDPNT LPNGR LPPLFNFKANEL+GVPAEMLVKL+PSH
Sbjct: 341 YSPNLRSTALEALVHPFFDELRDPNTRLPNGRHLPPLFNFKANELKGVPAEMLVKLVPSH 400
Query: 372 ARKQCALFGS 343
ARKQC+LF S
Sbjct: 401 ARKQCSLFAS 410
>sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3
Length = 411
Score = 132 bits (332), Expect = 3e-30
Identities = 60/70 (85%), Positives = 65/70 (92%)
Frame = -1
Query: 552 YSPNLRCTALEAXVHPFFDELRDPNTHLPNGRFLPPLFNFKANELRGVPAEMLVKLIPSH 373
YSPNLR TALEA VHPF+D++RDPNT LPNGRFLPPLFNFK NEL+GVPAEMLVKL+P H
Sbjct: 341 YSPNLRSTALEALVHPFYDDVRDPNTRLPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPH 400
Query: 372 ARKQCALFGS 343
ARKQCALFGS
Sbjct: 401 ARKQCALFGS 410
>pir||S37642 protein kinase MSK-3 (EC 2.7.1.-) [similarity] - alfalfa
gi|313148|emb|CAA48472.1| protein kinase [Medicago
sativa]
Length = 412
Score = 132 bits (332), Expect = 3e-30
Identities = 60/70 (85%), Positives = 65/70 (92%)
Frame = -1
Query: 552 YSPNLRCTALEAXVHPFFDELRDPNTHLPNGRFLPPLFNFKANELRGVPAEMLVKLIPSH 373
YSPNLR TALEA VHPF+D++RDPNT LPNGRFLPPLFNFK NEL+GVPAEMLVKL+P H
Sbjct: 342 YSPNLRSTALEALVHPFYDDVRDPNTRLPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPH 401
Query: 372 ARKQCALFGS 343
ARKQCALFGS
Sbjct: 402 ARKQCALFGS 411
>emb|CAA10288.1| protein kinase [Cicer arietinum]
Length = 313
Score = 125 bits (315), Expect = 3e-28
Identities = 61/70 (87%), Positives = 62/70 (88%)
Frame = -1
Query: 552 YSPNLRCTALEAXVHPFFDELRDPNTHLPNGRFLPPLFNFKANELRGVPAEMLVKLIPSH 373
YSPNLR TALEA VHPF DELRDPNT LPNGR LPPLFNFKANEL+GV AEMLVKLIP H
Sbjct: 244 YSPNLRSTALEALVHPFLDELRDPNTRLPNGRHLPPLFNFKANELKGVSAEMLVKLIPLH 303
Query: 372 ARKQCALFGS 343
ARKQCALF S
Sbjct: 304 ARKQCALFVS 313
>gb|AAM77397.1| GSK-like kinase [Triticum aestivum]
Length = 381
Score = 119 bits (299), Expect = 2e-26
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = -1
Query: 552 YSPNLRCTALEAXVHPFFDELRDPNTHLPNGRFLPPLFNFKANELRGVPAEMLVKLIPSH 373
YSP+LR TALEA +HPFFDELRDPNT LPNGRFLPPLFNFK +EL+GVP ++LVKLIP H
Sbjct: 312 YSPSLRSTALEALIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGVPMDILVKLIPEH 371
Query: 372 ARKQCALFG 346
ARK CA G
Sbjct: 372 ARKNCAFVG 380
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 469,272,323
Number of Sequences: 1393205
Number of extensions: 9827758
Number of successful extensions: 24902
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 24370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24868
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
