Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003394A_C01 KMC003394A_c01
(508 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC36697.1| protein phosphatase-2C; PP2C [Mesembryanthemum cr... 114 8e-25
ref|NP_177421.1| protein phosphatase 2C (AtP2C-HA); protein id: ... 75 3e-13
emb|CAA05875.1| protein phosphatase 2C [Arabidopsis thaliana] 75 3e-13
dbj|BAC05575.1| protein phosphatase 2C-like protein [Oryza sativ... 74 1e-12
ref|NP_200515.1| protein phosphatase 2C, ABI2; protein id: At5g5... 72 5e-12
>gb|AAC36697.1| protein phosphatase-2C; PP2C [Mesembryanthemum crystallinum]
Length = 380
Score = 114 bits (284), Expect = 8e-25
Identities = 55/81 (67%), Positives = 69/81 (84%)
Frame = -2
Query: 507 TDEDECLVLASDGLWDVMTNEEVGEVARHILRRRRRSLSTTEEISPAQVVADSLTEIACG 328
+DEDECL+LASDGLWDV++N+E GEVAR +LRRRRR++ +I PAQVVAD LT++A G
Sbjct: 298 SDEDECLILASDGLWDVISNDEAGEVARRLLRRRRRAM-VAGDICPAQVVADKLTQLAIG 356
Query: 327 RNSKDNISIIVVDLKSKGKRQ 265
RNS DNIS+IVVDLKS+ + Q
Sbjct: 357 RNSSDNISVIVVDLKSRRRHQ 377
>ref|NP_177421.1| protein phosphatase 2C (AtP2C-HA); protein id: At1g72770.1
[Arabidopsis thaliana] gi|25406209|pir||F96752 protein
phosphatase 2C (AtP2C-HA), 19519-17666 [imported] -
Arabidopsis thaliana
gi|12323769|gb|AAG51849.1|AC010926_12 protein
phosphatase 2C (AtP2C-HA); 19519-17666 [Arabidopsis
thaliana]
Length = 511
Score = 75.5 bits (184), Expect = 3e-13
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Frame = -2
Query: 501 EDECLVLASDGLWDVMTNEEVGEVARH--ILRRRRRSLSTTEE----ISPA-QVVADSLT 343
EDECL+LASDGLWDVM N+EV E+AR ++ ++ E I PA Q AD L+
Sbjct: 423 EDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLS 482
Query: 342 EIACGRNSKDNISIIVVDLKSKGKRQQR 259
+A + SKDNISIIV+DLK++ K + R
Sbjct: 483 MLALQKGSKDNISIIVIDLKAQRKFKTR 510
>emb|CAA05875.1| protein phosphatase 2C [Arabidopsis thaliana]
Length = 511
Score = 75.5 bits (184), Expect = 3e-13
Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Frame = -2
Query: 501 EDECLVLASDGLWDVMTNEEVGEVARH--ILRRRRRSLSTTEE----ISPA-QVVADSLT 343
EDECL+LASDGLWDVM N+EV E+AR ++ ++ E I PA Q AD L+
Sbjct: 423 EDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLS 482
Query: 342 EIACGRNSKDNISIIVVDLKSKGKRQQR 259
+A + SKDNISIIV+DLK++ K + R
Sbjct: 483 MLALQKGSKDNISIIVIDLKAQRKFKTR 510
>dbj|BAC05575.1| protein phosphatase 2C-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 467
Score = 73.9 bits (180), Expect = 1e-12
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 9/86 (10%)
Frame = -2
Query: 501 EDECLVLASDGLWDVMTNEEVGEVARHILRRRRRSLSTTEEISP---------AQVVADS 349
+DECLVLASDGLWDVM+NEEV +VAR + + T +P A+ A+
Sbjct: 377 DDECLVLASDGLWDVMSNEEVCDVARKRILLWHKKNGTNPASAPRSGDSSDPAAEAAAEC 436
Query: 348 LTEIACGRNSKDNISIIVVDLKSKGK 271
L+++A + SKDNIS+IVVDLK+ K
Sbjct: 437 LSKLALQKGSKDNISVIVVDLKAHRK 462
>ref|NP_200515.1| protein phosphatase 2C, ABI2; protein id: At5g57050.1 [Arabidopsis
thaliana] gi|3914239|sp|O04719|P2C2_ARATH Protein
phosphatase 2C ABI2 (PP2C) (Abscisic acid-insensitive 2)
gi|1945140|emb|CAA70163.1| ABI2 protein phosphatase 2C
[Arabidopsis thaliana] gi|1945142|emb|CAA70162.1| ABI2
protein phosphatase 2C [Arabidopsis thaliana]
gi|2564213|emb|CAA72538.1| ABI2 [Arabidopsis thaliana]
gi|8777445|dbj|BAA97035.1| protein phosphatase 2C ABI2
(PP2C) [Arabidopsis thaliana] gi|22531154|gb|AAM97081.1|
protein phosphatase 2C ABI2 [Arabidopsis thaliana]
Length = 423
Score = 71.6 bits (174), Expect = 5e-12
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 12/85 (14%)
Frame = -2
Query: 501 EDECLVLASDGLWDVMTNEEVGEVAR-HILRRRRRSLSTTEEISPAQ-----------VV 358
ED+CL+LASDGLWDVMTNEEV ++AR IL +++ E + PA+
Sbjct: 328 EDDCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSA 387
Query: 357 ADSLTEIACGRNSKDNISIIVVDLK 283
A+ L+++A + SKDNIS++VVDLK
Sbjct: 388 AEYLSKMALQKGSKDNISVVVVDLK 412
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 380,544,030
Number of Sequences: 1393205
Number of extensions: 7076852
Number of successful extensions: 19989
Number of sequences better than 10.0: 326
Number of HSP's better than 10.0 without gapping: 19189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19918
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
