Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003364A_C01 KMC003364A_c01
(908 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL16668.1|AF419850_1 suppressor of K+ transport growth defec... 383 e-105
gb|AAF21428.1|AF165422_1 suppressor of K+ transport growth defec... 382 e-105
ref|NP_180328.1| putative ATPase; protein id: At2g27600.1, suppo... 378 e-104
gb|AAM65285.1| putative ATPase [Arabidopsis thaliana] 374 e-102
gb|AAN03820.1|AF499028_1 AAA-ATPase-like protein [Oryza sativa (... 305 8e-82
>gb|AAL16668.1|AF419850_1 suppressor of K+ transport growth defect-like protein [Musa
acuminata]
Length = 292
Score = 383 bits (983), Expect = e-105
Identities = 187/211 (88%), Positives = 195/211 (91%)
Frame = -1
Query: 887 PFYHFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQ 708
P F+DEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNND+KVLVLAATNTPYALDQ
Sbjct: 82 PSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDEKVLVLAATNTPYALDQ 141
Query: 707 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFEYLASRTEGFSGSDISVCVK 528
AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNL E DFEYLA RTEGFSGSDISVCVK
Sbjct: 142 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDFEYLARRTEGFSGSDISVCVK 201
Query: 527 DVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGAVQITMQDLAAKGLASQILPPPITRTD 348
DVLFEPVRK QDA FF K +GMW+PCGPKQ GAVQ T+Q+LAAKGL ++ILPPPITR D
Sbjct: 202 DVLFEPVRKAQDATFFCKTSDGMWVPCGPKQPGAVQTTLQELAAKGLGAKILPPPITRND 261
Query: 347 FEKVLARQRPTVSKKDLEVHERFTKEFGEEG 255
FEKVLARQRPTVSK DLEVHERFTKEFGEEG
Sbjct: 262 FEKVLARQRPTVSKADLEVHERFTKEFGEEG 292
>gb|AAF21428.1|AF165422_1 suppressor of K+ transport growth defect-like protein
[Mesembryanthemum crystallinum]
Length = 317
Score = 382 bits (980), Expect = e-105
Identities = 185/211 (87%), Positives = 199/211 (93%)
Frame = -1
Query: 887 PFYHFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQ 708
P FVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG+ND+KVLVLAATNTPYALDQ
Sbjct: 107 PSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQ 166
Query: 707 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFEYLASRTEGFSGSDISVCVK 528
AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNL ESDFE+LA + EGFSGSDI+VCVK
Sbjct: 167 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEFLARKAEGFSGSDIAVCVK 226
Query: 527 DVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGAVQITMQDLAAKGLASQILPPPITRTD 348
DVLFEPVRKTQDAMFF+K + +W+PCGP+Q GAVQITMQDLAAKGLA++I+PPPI RTD
Sbjct: 227 DVLFEPVRKTQDAMFFYKTSDDVWVPCGPRQPGAVQITMQDLAAKGLAAKIVPPPIARTD 286
Query: 347 FEKVLARQRPTVSKKDLEVHERFTKEFGEEG 255
FEKVLARQRPTVSK DLEVHERFT+EFGEEG
Sbjct: 287 FEKVLARQRPTVSKSDLEVHERFTQEFGEEG 317
>ref|NP_180328.1| putative ATPase; protein id: At2g27600.1, supported by cDNA: 3818.,
supported by cDNA: gi_13605796, supported by cDNA:
gi_20147132 [Arabidopsis thaliana]
gi|25407909|pir||F84674 probable AAA-type ATPase
[imported] - Arabidopsis thaliana
gi|3860272|gb|AAC73040.1| putative ATPase [Arabidopsis
thaliana] gi|13605797|gb|AAK32884.1|AF367297_1
F10A12.27/F10A12.27 [Arabidopsis thaliana]
gi|20147133|gb|AAM10283.1| F10A12.27/F10A12.27
[Arabidopsis thaliana] gi|20197659|gb|AAM15184.1|
putative ATPase [Arabidopsis thaliana]
Length = 435
Score = 378 bits (970), Expect = e-104
Identities = 181/211 (85%), Positives = 195/211 (91%)
Frame = -1
Query: 887 PFYHFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQ 708
P FVDEIDSLCG RGEGNESEASRRIKTELLVQMQGVG+ND+KVLVLAATNTPYALDQ
Sbjct: 225 PSIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQ 284
Query: 707 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFEYLASRTEGFSGSDISVCVK 528
AIRRRFDKRIYIPLP+ KARQHMFKVHLGDTPHNL E DFEYL +TEGFSGSD+SVCVK
Sbjct: 285 AIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVK 344
Query: 527 DVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGAVQITMQDLAAKGLASQILPPPITRTD 348
DVLFEPVRKTQDAMFFFK+P+G W+PCGP+ GA+Q TMQDLA KGLA +I+PPPITRTD
Sbjct: 345 DVLFEPVRKTQDAMFFFKSPDGTWMPCGPRHPGAIQTTMQDLATKGLAEKIIPPPITRTD 404
Query: 347 FEKVLARQRPTVSKKDLEVHERFTKEFGEEG 255
FEKVLARQRPTVSK DL+VHERFT+EFGEEG
Sbjct: 405 FEKVLARQRPTVSKSDLDVHERFTQEFGEEG 435
>gb|AAM65285.1| putative ATPase [Arabidopsis thaliana]
Length = 434
Score = 374 bits (959), Expect = e-102
Identities = 181/211 (85%), Positives = 195/211 (91%)
Frame = -1
Query: 887 PFYHFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQ 708
P FVDEIDSLCG RGEGNESEASRRIKTELLVQMQGVG+ND+KVLVLAATNTPYALDQ
Sbjct: 225 PSIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNTPYALDQ 284
Query: 707 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFEYLASRTEGFSGSDISVCVK 528
AIRRRFDKRIYIPLP+ KARQHMFKVHLGDTPHNL E DFEYL +TEGFSGSD+SVCVK
Sbjct: 285 AIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSDVSVCVK 344
Query: 527 DVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGAVQITMQDLAAKGLASQILPPPITRTD 348
DVLFEPVRKTQDAMFFFK+P+G W+PCGP+ GA+Q TMQDLA KGLA +I+PPPITRTD
Sbjct: 345 DVLFEPVRKTQDAMFFFKSPDGTWMPCGPRHPGAIQTTMQDLATKGLA-EIIPPPITRTD 403
Query: 347 FEKVLARQRPTVSKKDLEVHERFTKEFGEEG 255
FEKVLARQRPTVSK DL+VHERFT+EFGEEG
Sbjct: 404 FEKVLARQRPTVSKSDLDVHERFTQEFGEEG 434
>gb|AAN03820.1|AF499028_1 AAA-ATPase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 408
Score = 305 bits (780), Expect = 8e-82
Identities = 148/171 (86%), Positives = 159/171 (92%)
Frame = -1
Query: 887 PFYHFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQ 708
P F+DEIDSLCGQRGEGNESEASRRIKTELLVQMQGVG+ND KVLVLAATNTPYALDQ
Sbjct: 223 PSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDDKVLVLAATNTPYALDQ 282
Query: 707 AIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFEYLASRTEGFSGSDISVCVK 528
A+RRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFE LA RT+GFSGSDI+VCVK
Sbjct: 283 AVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFENLARRTDGFSGSDIAVCVK 342
Query: 527 DVLFEPVRKTQDAMFFFKNPEGMWIPCGPKQQGAVQITMQDLAAKGLASQI 375
DVLFEPVRKTQDAMFFFK MW+PCGPKQ GAVQ TMQ+LA+KGLA+++
Sbjct: 343 DVLFEPVRKTQDAMFFFKADGDMWMPCGPKQSGAVQTTMQELASKGLAAKV 393
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 813,927,674
Number of Sequences: 1393205
Number of extensions: 18694141
Number of successful extensions: 49737
Number of sequences better than 10.0: 1045
Number of HSP's better than 10.0 without gapping: 45764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48088
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49641180728
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
