Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003358A_C01 KMC003358A_c01
(907 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09338 DnaJ-like protein MsJ1 - alfalfa gi|2370312|emb|CAA0... 473 e-132
pir||T43929 DnaJ protein homolog [imported] - Salix gilgiana gi|... 439 e-122
sp|P42824|DNJ2_ALLPO DnaJ protein homolog 2 gi|542196|pir||S4203... 428 e-119
gb|AAF28382.1|AF124139_1 DnaJ-like protein [Lycopersicon esculen... 427 e-119
pir||T07371 dnaJ protein homolog - potato gi|1125691|emb|CAA6396... 418 e-116
>pir||T09338 DnaJ-like protein MsJ1 - alfalfa gi|2370312|emb|CAA04447.1|
DnaJ-like protein [Medicago sativa]
gi|3202020|gb|AAC19391.1| DnaJ-like protein MsJ1
[Medicago sativa]
Length = 423
Score = 473 bits (1216), Expect = e-132
Identities = 231/256 (90%), Positives = 241/256 (93%), Gaps = 3/256 (1%)
Frame = +1
Query: 148 MFGRAP-RKSDNTKFYEVLGVPKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 324
MFGR P RKSDNTK+Y++LGV KSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE
Sbjct: 1 MFGRGPTRKSDNTKYYDILGVSKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYE 60
Query: 325 VLSDPEKKELYDQYGEDALKEGMGGG--ESFHNPFDIFETFFGGAGFGGGGSSRGRRQRQ 498
VLSDPEKKELYDQYGEDALKEGMGGG SFHNPFDIFE+FFG AGFGGGG SR RRQ+Q
Sbjct: 61 VLSDPEKKELYDQYGEDALKEGMGGGAGSSFHNPFDIFESFFG-AGFGGGGPSRARRQKQ 119
Query: 499 GEDVVHSIKVSLEDVYNGTTKKLSLSRNVLCLKCKGKGSKSGTAGRCFGCQGTGMKVIRR 678
GEDVVHSIKVSLEDVYNGTTKKLSLSRN LC KCKGKGSKSGTAGRCFGCQGTGMK+ RR
Sbjct: 120 GEDVVHSIKVSLEDVYNGTTKKLSLSRNALCSKCKGKGSKSGTAGRCFGCQGTGMKITRR 179
Query: 679 QIGLGMVQQMQHVCSDCRGTGEVISERDRCPQCKGNKISQEKKVLEVHVEKGMRQGQKIV 858
QIGLGM+QQMQHVC DC+GTGEVISERDRCPQCKGNKI+QEKKVLEVHVEKGM+QG KIV
Sbjct: 180 QIGLGMIQQMQHVCPDCKGTGEVISERDRCPQCKGNKITQEKKVLEVHVEKGMQQGHKIV 239
Query: 859 FEGQADEAPDTITGDI 906
FEGQADE PDTITGDI
Sbjct: 240 FEGQADELPDTITGDI 255
>pir||T43929 DnaJ protein homolog [imported] - Salix gilgiana
gi|4589726|dbj|BAA76883.1| DnaJ homolog protein [Salix
gilgiana] gi|4589739|dbj|BAA76888.1| DnaJ homolog
protein [Salix gilgiana]
Length = 423
Score = 439 bits (1129), Expect = e-122
Identities = 204/255 (80%), Positives = 233/255 (91%), Gaps = 2/255 (0%)
Frame = +1
Query: 148 MFGRAPRKSDNTKFYEVLGVPKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 327
MFGRAPR+SDNTK+YEVL V K AS+DE+KKAY+KAA+KNHPDKGGDPEKFKEL QAYEV
Sbjct: 1 MFGRAPRRSDNTKYYEVLAVSKGASQDELKKAYKKAAIKNHPDKGGDPEKFKELSQAYEV 60
Query: 328 LSDPEKKELYDQYGEDALKEGMG--GGESFHNPFDIFETFFGGAGFGGGGSSRGRRQRQG 501
LSDP+K+E+YDQYGEDALKEGMG GG HNPFDIFE+FFGG GFGGG SSRGRRQ+QG
Sbjct: 61 LSDPDKREIYDQYGEDALKEGMGPGGGGGGHNPFDIFESFFGGGGFGGGSSSRGRRQKQG 120
Query: 502 EDVVHSIKVSLEDVYNGTTKKLSLSRNVLCLKCKGKGSKSGTAGRCFGCQGTGMKVIRRQ 681
EDV H +KVSLED+YNGT+KKLSLSRN+LC KCKGKGSKSG G+C GCQGTGMKV RQ
Sbjct: 121 EDVAHPLKVSLEDLYNGTSKKLSLSRNILCAKCKGKGSKSGAFGKCRGCQGTGMKVSIRQ 180
Query: 682 IGLGMVQQMQHVCSDCRGTGEVISERDRCPQCKGNKISQEKKVLEVHVEKGMRQGQKIVF 861
IGLGM+QQMQHVC +CRG+GE+ISE+D+CP C+GNK++QEK+VLEVHVE+GM+ GQKIVF
Sbjct: 181 IGLGMMQQMQHVCPECRGSGELISEKDKCPHCRGNKVTQEKRVLEVHVERGMQHGQKIVF 240
Query: 862 EGQADEAPDTITGDI 906
EGQADEAPDTITGD+
Sbjct: 241 EGQADEAPDTITGDV 255
>sp|P42824|DNJ2_ALLPO DnaJ protein homolog 2 gi|542196|pir||S42031 LDJ2 protein - leek
gi|454303|emb|CAA54720.1| LDJ2 [Allium porrum]
Length = 418
Score = 428 bits (1101), Expect = e-119
Identities = 195/253 (77%), Positives = 230/253 (90%)
Frame = +1
Query: 148 MFGRAPRKSDNTKFYEVLGVPKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 327
MFGRAP+KSDNTK+YEVLGV K+A+ +++KKAYRKAA+KNHPDKGGDPEKFKE+GQAYEV
Sbjct: 1 MFGRAPKKSDNTKYYEVLGVSKNATPEDLKKAYRKAAIKNHPDKGGDPEKFKEIGQAYEV 60
Query: 328 LSDPEKKELYDQYGEDALKEGMGGGESFHNPFDIFETFFGGAGFGGGGSSRGRRQRQGED 507
L+DPEK+E+YDQYGE+ LKEGMGGG H+PFDIF++FFGG GFGGGGSSRGRRQR+GED
Sbjct: 61 LNDPEKREIYDQYGEEGLKEGMGGGGGVHDPFDIFQSFFGGGGFGGGGSSRGRRQRRGED 120
Query: 508 VVHSIKVSLEDVYNGTTKKLSLSRNVLCLKCKGKGSKSGTAGRCFGCQGTGMKVIRRQIG 687
VVH +KVSLED+YNGT+KKLSLSRNVLC KCKGKGSKSG + C CQG+GMKV RQ+G
Sbjct: 121 VVHPLKVSLEDLYNGTSKKLSLSRNVLCTKCKGKGSKSGASMNCASCQGSGMKVSIRQLG 180
Query: 688 LGMVQQMQHVCSDCRGTGEVISERDRCPQCKGNKISQEKKVLEVHVEKGMRQGQKIVFEG 867
GM+QQMQH C++C+GTGE+IS++DRCPQCKG K+ Q+KKVLEVHVEKGM+ GQKI F G
Sbjct: 181 PGMIQQMQHPCNECKGTGEMISDKDRCPQCKGEKVVQQKKVLEVHVEKGMQNGQKITFPG 240
Query: 868 QADEAPDTITGDI 906
+ADEAPDT+TGDI
Sbjct: 241 EADEAPDTVTGDI 253
>gb|AAF28382.1|AF124139_1 DnaJ-like protein [Lycopersicon esculentum]
Length = 419
Score = 427 bits (1099), Expect = e-119
Identities = 199/255 (78%), Positives = 230/255 (90%), Gaps = 2/255 (0%)
Frame = +1
Query: 148 MFGRAPRKSDNTKFYEVLGVPKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 327
MFGRAP+KSDNTK+YE+LGVPK+AS++++KKAYRKAA+KNHPDKGGDPEKFKEL QAYEV
Sbjct: 1 MFGRAPKKSDNTKYYEILGVPKAASQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 328 LSDPEKKELYDQYGEDALKEGMGGGESFHNPFDIFETFFGGAG--FGGGGSSRGRRQRQG 501
LSDPEK+E+YDQYGEDALKEGMGGG H PFDIF++FFGG G FGGGGSSR RRQR+G
Sbjct: 61 LSDPEKREIYDQYGEDALKEGMGGGGGGHEPFDIFQSFFGGGGNPFGGGGSSRVRRQRRG 120
Query: 502 EDVVHSIKVSLEDVYNGTTKKLSLSRNVLCLKCKGKGSKSGTAGRCFGCQGTGMKVIRRQ 681
EDV+H +KVSLED+YNGT+KKLSLSRNVLC KCKGKGSKSG + +C GCQG+GMKV RQ
Sbjct: 121 EDVIHPLKVSLEDLYNGTSKKLSLSRNVLCSKCKGKGSKSGASMKCSGCQGSGMKVSIRQ 180
Query: 682 IGLGMVQQMQHVCSDCRGTGEVISERDRCPQCKGNKISQEKKVLEVHVEKGMRQGQKIVF 861
+G M+QQMQH C++C+GTGE IS++DRCPQCKG K+ QEKKVLEVHVEKGM+ GQKI F
Sbjct: 181 LGPSMIQQMQHPCNECKGTGETISDKDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITF 240
Query: 862 EGQADEAPDTITGDI 906
G+ADEAPDTITGDI
Sbjct: 241 PGEADEAPDTITGDI 255
>pir||T07371 dnaJ protein homolog - potato gi|1125691|emb|CAA63965.1| DnaJ
protein [Solanum tuberosum]
Length = 419
Score = 418 bits (1075), Expect = e-116
Identities = 195/254 (76%), Positives = 229/254 (89%), Gaps = 1/254 (0%)
Frame = +1
Query: 148 MFGRAPRKSDNTKFYEVLGVPKSASEDEIKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 327
MFGRAP KSDNTK+YE+LGVPK+A+++++KKAYRKAA+KNHPDKGGDPEKFKEL QAYEV
Sbjct: 1 MFGRAPEKSDNTKYYEILGVPKTAAQEDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEV 60
Query: 328 LSDPEKKELYDQYGEDALKEGMGGGESFHNPFDIFETFFGGAGFGGGG-SSRGRRQRQGE 504
LSDPEK+E+YDQYGEDALKEGMGGG H+PFDIF +FFGG+ FGGGG SSRGRRQR+GE
Sbjct: 61 LSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGSPFGGGGGSSRGRRQRRGE 120
Query: 505 DVVHSIKVSLEDVYNGTTKKLSLSRNVLCLKCKGKGSKSGTAGRCFGCQGTGMKVIRRQI 684
DVVH +KVSLED+YNGT+KKLSLSRNVLC KCKGKGSKSG + +C GCQG+GMKV RQ+
Sbjct: 121 DVVHPLKVSLEDLYNGTSKKLSLSRNVLCSKCKGKGSKSGASMKCSGCQGSGMKVTIRQL 180
Query: 685 GLGMVQQMQHVCSDCRGTGEVISERDRCPQCKGNKISQEKKVLEVHVEKGMRQGQKIVFE 864
G M+QQMQH C++C+GTGE+I+++DRC QCKG K+ QEKKVLEV VEKGM+ GQKI F
Sbjct: 181 GPSMIQQMQHPCNECKGTGEMINDKDRCGQCKGEKVVQEKKVLEVVVEKGMQNGQKITFP 240
Query: 865 GQADEAPDTITGDI 906
G+ADEAPDT+TGDI
Sbjct: 241 GEADEAPDTVTGDI 254
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 878,658,796
Number of Sequences: 1393205
Number of extensions: 23002732
Number of successful extensions: 136606
Number of sequences better than 10.0: 1600
Number of HSP's better than 10.0 without gapping: 94214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124182
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49363855696
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
