Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003287A_C01 KMC003287A_c01
(730 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q41014|FENS_PEA Ferredoxin--NADP reductase, root isozyme, chl... 198 7e-50
pir||T06773 ferredoxin-NADP reductase (EC 1.18.1.2) - garden pea... 198 7e-50
sp|O23877|FENT_ORYSA Ferredoxin--NADP reductase, embryo isozyme,... 189 3e-47
sp|O04397|FENS_TOBAC Ferredoxin--NADP reductase, root-type isozy... 189 4e-47
ref|NP_564355.1| ferrodoxin NADP oxidoreductase, putative; prote... 188 8e-47
>sp|Q41014|FENS_PEA Ferredoxin--NADP reductase, root isozyme, chloroplast precursor
(FNR)
Length = 377
Score = 198 bits (503), Expect = 7e-50
Identities = 92/103 (89%), Positives = 99/103 (95%)
Frame = -2
Query: 729 LYHDEFTKYLKDYPTHFRYDIALSREQKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 550
LY DEFTKYLKDYP +FRY+ ALSRE+KNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF
Sbjct: 275 LYDDEFTKYLKDYPDNFRYNRALSREEKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 334
Query: 549 CGLRGMMPGIQETLKRVADQRGENWDEKLSQLKKNKPWHVEVY 421
CGLRGMMPGIQETLKRVA++RGE+W+EKLSQLKKNK WHVEVY
Sbjct: 335 CGLRGMMPGIQETLKRVAEKRGESWEEKLSQLKKNKQWHVEVY 377
>pir||T06773 ferredoxin-NADP reductase (EC 1.18.1.2) - garden pea (fragment)
gi|1480347|emb|CAA67796.1| ferrodoxin NADP
oxidoreductase [Pisum sativum]
Length = 378
Score = 198 bits (503), Expect = 7e-50
Identities = 92/103 (89%), Positives = 99/103 (95%)
Frame = -2
Query: 729 LYHDEFTKYLKDYPTHFRYDIALSREQKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 550
LY DEFTKYLKDYP +FRY+ ALSRE+KNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF
Sbjct: 276 LYDDEFTKYLKDYPDNFRYNRALSREEKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 335
Query: 549 CGLRGMMPGIQETLKRVADQRGENWDEKLSQLKKNKPWHVEVY 421
CGLRGMMPGIQETLKRVA++RGE+W+EKLSQLKKNK WHVEVY
Sbjct: 336 CGLRGMMPGIQETLKRVAEKRGESWEEKLSQLKKNKQWHVEVY 378
>sp|O23877|FENT_ORYSA Ferredoxin--NADP reductase, embryo isozyme, chloroplast precursor
(FNR) gi|7433377|pir||T02977 ferredoxin-NADP reductase
(EC 1.18.1.2) precursor - rice
gi|1778686|dbj|BAA13417.1| precursor ferredoxin-NADP+
oxidoreductase [Oryza sativa (japonica cultivar-group)]
Length = 378
Score = 189 bits (481), Expect = 3e-47
Identities = 87/103 (84%), Positives = 96/103 (92%)
Frame = -2
Query: 729 LYHDEFTKYLKDYPTHFRYDIALSREQKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 550
LY +EFT YL+ YP +FRYD ALSREQKNKNGGKMYVQDKIEEYSDEIFKLLD GAHIYF
Sbjct: 276 LYDEEFTNYLQQYPDNFRYDKALSREQKNKNGGKMYVQDKIEEYSDEIFKLLDGGAHIYF 335
Query: 549 CGLRGMMPGIQETLKRVADQRGENWDEKLSQLKKNKPWHVEVY 421
CGL+GMMPGIQ+TLKRVA+QRGE+W++KLSQLKKNK WHVEVY
Sbjct: 336 CGLKGMMPGIQDTLKRVAEQRGESWEQKLSQLKKNKQWHVEVY 378
>sp|O04397|FENS_TOBAC Ferredoxin--NADP reductase, root-type isozyme, chloroplast
precursor (FNR) gi|7433372|pir||T02215 ferredoxin-NADP
reductase (EC 1.18.1.2) precursor - common tobacco
gi|2190038|dbj|BAA20365.1| ferredoxin-NADP
oxidoreductase [Nicotiana tabacum]
Length = 375
Score = 189 bits (479), Expect = 4e-47
Identities = 87/103 (84%), Positives = 95/103 (91%)
Frame = -2
Query: 729 LYHDEFTKYLKDYPTHFRYDIALSREQKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 550
LY DEFTKYL DYP +FRYD ALSREQKN GGKMYVQDKIEEYSDEIFKLLD GAHIYF
Sbjct: 273 LYDDEFTKYLNDYPGNFRYDRALSREQKNNKGGKMYVQDKIEEYSDEIFKLLDEGAHIYF 332
Query: 549 CGLRGMMPGIQETLKRVADQRGENWDEKLSQLKKNKPWHVEVY 421
CGL+GMMPGIQ+TLKRVA++RGE+W++KLSQLKKNK WHVEVY
Sbjct: 333 CGLKGMMPGIQDTLKRVAERRGESWEQKLSQLKKNKQWHVEVY 375
>ref|NP_564355.1| ferrodoxin NADP oxidoreductase, putative; protein id: At1g30510.1,
supported by cDNA: 40436. [Arabidopsis thaliana]
Length = 381
Score = 188 bits (477), Expect = 8e-47
Identities = 86/103 (83%), Positives = 97/103 (93%)
Frame = -2
Query: 729 LYHDEFTKYLKDYPTHFRYDIALSREQKNKNGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 550
LY +EFTKYLKD+P +FR+D ALSRE+KNK GGKMYVQDKIEEYSDEIFKLLDNGAHIYF
Sbjct: 279 LYDEEFTKYLKDHPDNFRFDKALSREEKNKKGGKMYVQDKIEEYSDEIFKLLDNGAHIYF 338
Query: 549 CGLRGMMPGIQETLKRVADQRGENWDEKLSQLKKNKPWHVEVY 421
CGL+GMMPGIQ+TLKRVA++RGE+WD KLSQL+KNK WHVEVY
Sbjct: 339 CGLKGMMPGIQDTLKRVAEERGESWDLKLSQLRKNKQWHVEVY 381
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 585,572,826
Number of Sequences: 1393205
Number of extensions: 12160559
Number of successful extensions: 28581
Number of sequences better than 10.0: 308
Number of HSP's better than 10.0 without gapping: 27431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28495
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34343566934
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
