Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003284A_C01 KMC003284A_c01
(438 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG34805.1|AF243370_1 glutathione S-transferase GST 15 [Glyci... 50 6e-06
gb|AAG34808.1|AF243373_1 glutathione S-transferase GST 18 [Glyci... 39 0.019
ref|NP_704867.1| hyptohetical protein [Plasmodium falciparum 3D7... 32 2.3
gb|AAG16759.1| putative glutathione S-transferase T4 [Lycopersic... 31 4.0
gb|AAG34810.1|AF243375_1 glutathione S-transferase GST 20 [Glyci... 30 5.2
>gb|AAG34805.1|AF243370_1 glutathione S-transferase GST 15 [Glycine max]
Length = 221
Score = 50.1 bits (118), Expect = 6e-06
Identities = 23/38 (60%), Positives = 27/38 (70%), Gaps = 1/38 (2%)
Frame = -3
Query: 436 PRLHAWFNNFMDVPVINNN-PEHEKLVAAMKVFREKAL 326
P LH+W+NNF DV VI N P+HEK+VA K REK L
Sbjct: 181 PHLHSWYNNFKDVAVIKENLPDHEKMVAFAKFIREKRL 218
>gb|AAG34808.1|AF243373_1 glutathione S-transferase GST 18 [Glycine max]
Length = 220
Score = 38.5 bits (88), Expect = 0.019
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 436 PRLHAWFNNFMDVPVINNN-PEHEKLVAAMKVFRE 335
PRLHAW NF VPVI N P++EKL+ ++ R+
Sbjct: 182 PRLHAWTQNFKQVPVIKENLPDYEKLLIHLEWRRQ 216
>ref|NP_704867.1| hyptohetical protein [Plasmodium falciparum 3D7]
gi|23505230|emb|CAD52010.1| hyptohetical protein
[Plasmodium falciparum 3D7]
Length = 1512
Score = 31.6 bits (70), Expect = 2.3
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 17 CFKKLTKLITFLNMYASSLILKRMEYYINLQQLFYNRAEQEQEFKHY*SLNHNFI 181
C K+ +IT +SL+ E+Y +++L R + + E K + NHN+I
Sbjct: 1346 CLNKILDIITRFINITTSLVSLICEHYNEIKKLIQERKDIDMEEKTHEKNNHNYI 1400
>gb|AAG16759.1| putative glutathione S-transferase T4 [Lycopersicon esculentum]
Length = 226
Score = 30.8 bits (68), Expect = 4.0
Identities = 14/32 (43%), Positives = 18/32 (55%), Gaps = 1/32 (3%)
Frame = -3
Query: 436 PRLHAWFNNFMDVPVINN-NPEHEKLVAAMKV 344
P LH W NF +P+IN P+ E LV +V
Sbjct: 182 PSLHQWAENFKQIPIINECMPQQETLVNYFQV 213
>gb|AAG34810.1|AF243375_1 glutathione S-transferase GST 20 [Glycine max]
Length = 224
Score = 30.4 bits (67), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (54%), Gaps = 1/36 (2%)
Frame = -3
Query: 436 PRLHAWFNNFMDVPVINNN-PEHEKLVAAMKVFREK 332
P AW NF+ PVI +N P +K++ +K R K
Sbjct: 185 PATTAWMTNFLSNPVIKDNLPPRDKMLVYLKDLRSK 220
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 325,917,188
Number of Sequences: 1393205
Number of extensions: 5723670
Number of successful extensions: 10790
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10787
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 6722674608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
