Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003271A_C01 KMC003271A_c01
(712 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564507.1| expressed protein; protein id: At1g47480.1, sup... 97 3e-19
gb|AAL57633.1| AT3g48690/T8P19_200 [Arabidopsis thaliana] 95 8e-19
ref|NP_190438.1| putative protein; protein id: At3g48690.1, supp... 95 8e-19
gb|AAM61103.1| unknown [Arabidopsis thaliana] 94 1e-18
ref|NP_190439.1| putative protein; protein id: At3g48700.1 [Arab... 91 2e-17
>ref|NP_564507.1| expressed protein; protein id: At1g47480.1, supported by cDNA:
111056. [Arabidopsis thaliana] gi|25405208|pir||A96515
hypothetical protein F16N3.25 [imported] - Arabidopsis
thaliana gi|5668813|gb|AAD46039.1|AC007519_24 Similar to
gb|X77136 HSR203J protein from Nicotiana tabacum and is
a member of the PF|00135 Carboxylesterase family. ESTs
gb|Z25688 and gb|F14025 come from this gene.
[Arabidopsis thaliana]
Length = 314
Score = 96.7 bits (239), Expect = 3e-19
Identities = 51/136 (37%), Positives = 81/136 (59%), Gaps = 16/136 (11%)
Frame = -2
Query: 699 LXLQGMVLIHPFF------GNDERDKLA--------EFLFPTYGGIDDPRIH--APRDPK 568
L ++G+ +IHP+F G + +D+ EF+ P+ G DDP I+ A P
Sbjct: 178 LKIKGIGMIHPYFWGTQPIGAEIKDEARKQMVDGWWEFVCPSEKGSDDPWINPFADGSPD 237
Query: 567 ISGLGCGKVLVITAENDFLRERGRSYHEALKKSGWSGTVEMVETQGEGHCFHLFDPTLEK 388
+ GLGC +V++ AE D L ERG+ Y+E L KS W G VE++ET+ + H FH+F+P ++
Sbjct: 238 LGGLGCERVMITVAEKDILNERGKMYYERLVKSEWKGKVEIMETKEKDHVFHIFEPDCDE 297
Query: 387 SVALVNQFSSFIKQVQ 340
++ +V + FI QV+
Sbjct: 298 AMEMVRCLALFINQVE 313
>gb|AAL57633.1| AT3g48690/T8P19_200 [Arabidopsis thaliana]
Length = 324
Score = 95.1 bits (235), Expect = 8e-19
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 18/133 (13%)
Frame = -2
Query: 693 LQGMVLIHPFFGN----DERDKLAEFLFP------------TYGGIDDPRIHAPRDPKI- 565
+ G++L+HP+F + DE+D E L + G DDP ++ + +
Sbjct: 189 ISGIILLHPYFWSKTPIDEKDTKDETLRMKIEAFWMMASPNSKDGTDDPLLNVVQSESVD 248
Query: 564 -SGLGCGKVLVITAENDFLRERGRSYHEALKKSGWSGTVEMVETQGEGHCFHLFDPTLEK 388
SGLGCGKVLV+ AE D L +G Y L+KSGW G VE+VE++GE H FHL P +
Sbjct: 249 LSGLGCGKVLVMVAEKDALVRQGWGYAAKLEKSGWKGEVEVVESEGEDHVFHLLKPECDN 308
Query: 387 SVALVNQFSSFIK 349
++ ++++FS FIK
Sbjct: 309 AIEVMHKFSGFIK 321
>ref|NP_190438.1| putative protein; protein id: At3g48690.1, supported by cDNA:
gi_18086340 [Arabidopsis thaliana]
gi|11279652|pir||T46213 hypothetical protein T8P19.200 -
Arabidopsis thaliana gi|6523100|emb|CAB62358.1| putative
protein [Arabidopsis thaliana]
Length = 324
Score = 95.1 bits (235), Expect = 8e-19
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 18/133 (13%)
Frame = -2
Query: 693 LQGMVLIHPFFGN----DERDKLAEFLFP------------TYGGIDDPRIHAPRDPKI- 565
+ G++L+HP+F + DE+D E L + G DDP ++ + +
Sbjct: 189 ISGIILLHPYFWSKTPIDEKDTKDETLRMKIEAFWMMASPNSKDGTDDPLLNVVQSESVD 248
Query: 564 -SGLGCGKVLVITAENDFLRERGRSYHEALKKSGWSGTVEMVETQGEGHCFHLFDPTLEK 388
SGLGCGKVLV+ AE D L +G Y L+KSGW G VE+VE++GE H FHL P +
Sbjct: 249 LSGLGCGKVLVMVAEKDALVRQGWGYAAKLEKSGWKGEVEVVESEGEDHVFHLLKPECDN 308
Query: 387 SVALVNQFSSFIK 349
++ ++++FS FIK
Sbjct: 309 AIEVMHKFSGFIK 321
>gb|AAM61103.1| unknown [Arabidopsis thaliana]
Length = 314
Score = 94.4 bits (233), Expect = 1e-18
Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 16/134 (11%)
Frame = -2
Query: 693 LQGMVLIHPFF------GNDERDKLA--------EFLFPTYGGIDDPRIH--APRDPKIS 562
++G+ +IHP+F G + +D+ EF+ P+ G DDP I+ A P +
Sbjct: 180 IKGIGMIHPYFWGTQPIGAEIKDEAMKQMVDGWWEFVCPSKKGSDDPWINPFADGSPDLG 239
Query: 561 GLGCGKVLVITAENDFLRERGRSYHEALKKSGWSGTVEMVETQGEGHCFHLFDPTLEKSV 382
GLGC +V++ AE D L ERG+ Y E L KS W G VE++ET+ + H FH+F+P ++++
Sbjct: 240 GLGCERVMITVAEKDILNERGKMYFERLVKSEWKGKVEIMETKEKDHVFHIFEPDCDEAM 299
Query: 381 ALVNQFSSFIKQVQ 340
+V + FI QV+
Sbjct: 300 EMVRCLALFINQVE 313
>ref|NP_190439.1| putative protein; protein id: At3g48700.1 [Arabidopsis thaliana]
gi|11358445|pir||T46214 hypothetical protein T8P19.210 -
Arabidopsis thaliana gi|6523101|emb|CAB62359.1| putative
protein [Arabidopsis thaliana]
gi|26452935|dbj|BAC43544.1| unknown protein [Arabidopsis
thaliana] gi|28973041|gb|AAO63845.1| unknown protein
[Arabidopsis thaliana]
Length = 329
Score = 90.9 bits (224), Expect = 2e-17
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 19/134 (14%)
Frame = -2
Query: 693 LQGMVLIHPFFGND---ERDKLAEFLFPTY-------------GGIDDPRIHAPRDPKI- 565
+ G++L+HP+F + + + + T+ G DDP I+ + +
Sbjct: 193 ISGIILVHPYFWSKTPVDDKETTDVAIRTWIESVWTLASPNSKDGSDDPFINVVQSESVD 252
Query: 564 -SGLGCGKVLVITAENDFLRERGRSYHEALKKSGWSGTV-EMVETQGEGHCFHLFDPTLE 391
SGLGCGKVLV+ AE D L +G Y E L KS W+G V ++VET+GEGH FHL DP E
Sbjct: 253 LSGLGCGKVLVMVAEKDALVRQGWGYWEKLGKSRWNGEVLDVVETKGEGHVFHLRDPNSE 312
Query: 390 KSVALVNQFSSFIK 349
K+ LV++F+ FIK
Sbjct: 313 KAHELVHRFAGFIK 326
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 658,447,811
Number of Sequences: 1393205
Number of extensions: 15959256
Number of successful extensions: 61313
Number of sequences better than 10.0: 236
Number of HSP's better than 10.0 without gapping: 53723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60591
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32654539052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
