Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003259A_C01 KMC003259A_c01
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL79693.1|AC087599_12 hypothetical protein [Oryza sativa] 105 3e-22
ref|NP_199195.1| putative protein; protein id: At5g43820.1 [Arab... 84 2e-15
ref|NP_004146.1| serine (or cysteine) proteinase inhibitor, clad... 33 2.8
sp|Q23868|TAGC_DICDI Prestalk-specific protein TAGC precursor gi... 33 3.7
gb|EAA15722.1| hypothetical protein [Plasmodium yoelii yoelii] 32 4.8
>gb|AAL79693.1|AC087599_12 hypothetical protein [Oryza sativa]
Length = 194
Score = 105 bits (263), Expect = 3e-22
Identities = 56/105 (53%), Positives = 80/105 (75%)
Frame = -2
Query: 599 SLEKIHREGRQLVKGGSSRPTIKQLQQRVGIKPTLNDCLDGLLFLHEIHNSEYLLKSSVV 420
SL K R+ Q+V+GGS+ + KQ+Q +VGI PT+ DCLDGL L E+H +EY LKSSV+
Sbjct: 93 SLHKALRDTNQMVRGGSAL-SAKQMQLQVGILPTIADCLDGLRTLCEMHQAEYALKSSVI 151
Query: 419 SALSAMALKPSASDLGALQQLLVDQPNLLTEEVQFVFDVIFAEEL 285
S+L+ + S+SD+ A++QLLVDQPN+ +EVQ +FD+IFA+E+
Sbjct: 152 SSLTWTS---SSSDIAAMRQLLVDQPNIPKDEVQAIFDIIFADEI 193
>ref|NP_199195.1| putative protein; protein id: At5g43820.1 [Arabidopsis thaliana]
gi|10177952|dbj|BAB11311.1|
emb|CAB67677.1~gene_id:MQD19.18~similar to unknown
protein [Arabidopsis thaliana]
Length = 680
Score = 83.6 bits (205), Expect = 2e-15
Identities = 44/106 (41%), Positives = 67/106 (62%)
Frame = -2
Query: 602 LSLEKIHREGRQLVKGGSSRPTIKQLQQRVGIKPTLNDCLDGLLFLHEIHNSEYLLKSSV 423
L+ EK+HR+G QL + SS+ +++++R+G+KP + DCL+GL L+++H S+
Sbjct: 596 LTFEKLHRDGLQLREIESSK---RRVEERIGVKPCITDCLEGLSILYDMHQSD------- 645
Query: 422 VSALSAMALKPSASDLGALQQLLVDQPNLLTEEVQFVFDVIFAEEL 285
DL ALQ L+VDQPN+ +EVQ +FDVIFAEE+
Sbjct: 646 ------------PGDLNALQYLVVDQPNIPKDEVQHIFDVIFAEEI 679
>ref|NP_004146.1| serine (or cysteine) proteinase inhibitor, clade B (ovalbumin),
member 9; protease inhibitor 9 (ovalbumin type) [Homo
sapiens] gi|1709896|sp|P50453|SPB9_HUMAN Cytoplasmic
antiproteinase 3 (CAP3) (CAP-3) (Protease inhibitor 9)
(Serpin B9) gi|11273403|pir||B59273 proteinase inhibitor
9 - human gi|1160929|gb|AAC41940.1| cytoplasmic
antiproteinase 3 gi|1613850|gb|AAC50793.1| serine
proteinase inhibitor [Homo sapiens]
gi|12803429|gb|AAH02538.1|AAH02538 serine (or cysteine)
proteinase inhibitor, clade B (ovalbumin), member 9
[Homo sapiens] gi|20302479|dbj|BAB91078.1| serine
protease inhibitor 9 [Homo sapiens]
Length = 376
Score = 33.1 bits (74), Expect = 2.8
Identities = 18/49 (36%), Positives = 31/49 (62%)
Frame = +2
Query: 167 ITINSASTIMLVGSKGSLEVQKAQALPCTMSISIVEDIKIVLQQILHQI 313
++I+SA ++L+G+KG+ Q AQAL S++ EDI Q +L ++
Sbjct: 33 VSISSALAMVLLGAKGNTATQMAQAL----SLNTEEDIHRAFQSLLTEV 77
>sp|Q23868|TAGC_DICDI Prestalk-specific protein TAGC precursor gi|7489888|pir||T18279
multidrug resistance transport protein - slime mold
(Dictyostelium discoideum) gi|1399915|gb|AAB03331.1|
multidrug resistance transporter/Ser protease
Length = 1743
Score = 32.7 bits (73), Expect = 3.7
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 39 KILINYGFLILKILIGLKIYLIKNISKIN*NPLNNNDNKIHKLSRLILHQQ 191
K+L+ G ++L ++IG+K+ + + NNN+N + R++LH +
Sbjct: 9 KLLLISGLILLVLVIGIKLDIFLSSKSTEYIKFNNNNNHFKRDKRILLHNE 59
>gb|EAA15722.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 663
Score = 32.3 bits (72), Expect = 4.8
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Frame = +3
Query: 36 YKILINYGFLILKILIGLKIYLIKNI--SKIN*NPLNNND-NKIHKLSRLILHQQSCLWD 206
YK+ I + L K I N +KIN N NN D N I+ +S+L L ++C
Sbjct: 279 YKLKITNDNKFYEFLNSYKNEFINNSFRTKINNNNNNNIDMNNINIVSQLNL--ENCTTQ 336
Query: 207 QRAPLRYKKLKHSHVQCQYR**RISR*FFSKYYIKYKLNFLSKEI 341
R P+ YK+L + C Y I F SK + N LS I
Sbjct: 337 NRIPILYKRLLYD--TCIYENKIIIMQFHSKIFEYDPFNMLSAHI 379
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 473,782,190
Number of Sequences: 1393205
Number of extensions: 9820317
Number of successful extensions: 27658
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27611
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
