Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003227A_C01 KMC003227A_c01
(637 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51485 sugar transporter-like protein - Arabidopsis thalian... 180 2e-44
ref|NP_568328.1| sugar transporter-like protein; protein id: At5... 180 2e-44
gb|AAF74569.1|AF215855_1 hexose transporter [Arabidopsis thaliana] 179 3e-44
dbj|BAB64614.1| putative hexose transporter [Oryza sativa (japon... 179 3e-44
gb|AAO26330.1| putative sugar transporter [Brassica rapa subsp. ... 179 4e-44
>pir||T51485 sugar transporter-like protein - Arabidopsis thaliana
gi|9755825|emb|CAC01856.1| sugar transporter-like
protein [Arabidopsis thaliana]
Length = 560
Score = 180 bits (456), Expect = 2e-44
Identities = 93/101 (92%), Positives = 97/101 (95%)
Frame = -2
Query: 636 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSLSLGMHWISNFVIGLYFLSVVNKFGI 457
TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAV+LSLGMHWISNFVIGLYFLSVV KFGI
Sbjct: 460 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVTKFGI 519
Query: 456 SSVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIEHALSSSS 334
SSVYLGF+ VCVLAVLYIAGNVVETKGRSLEEIE AL+S +
Sbjct: 520 SSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEIELALTSGA 560
>ref|NP_568328.1| sugar transporter-like protein; protein id: At5g16150.1, supported
by cDNA: gi_16648752, supported by cDNA: gi_20259505
[Arabidopsis thaliana] gi|16648753|gb|AAL25568.1|
AT5g16150/T21H19_70 [Arabidopsis thaliana]
gi|20259506|gb|AAM13873.1| putative sugar transporter
[Arabidopsis thaliana] gi|21436467|gb|AAM51434.1|
putative sugar transporter [Arabidopsis thaliana]
Length = 546
Score = 180 bits (456), Expect = 2e-44
Identities = 93/101 (92%), Positives = 97/101 (95%)
Frame = -2
Query: 636 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSLSLGMHWISNFVIGLYFLSVVNKFGI 457
TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAV+LSLGMHWISNFVIGLYFLSVV KFGI
Sbjct: 446 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVTKFGI 505
Query: 456 SSVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIEHALSSSS 334
SSVYLGF+ VCVLAVLYIAGNVVETKGRSLEEIE AL+S +
Sbjct: 506 SSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEIELALTSGA 546
>gb|AAF74569.1|AF215855_1 hexose transporter [Arabidopsis thaliana]
Length = 515
Score = 179 bits (454), Expect = 3e-44
Identities = 94/101 (93%), Positives = 96/101 (94%)
Frame = -2
Query: 636 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSLSLGMHWISNFVIGLYFLSVVNKFGI 457
TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAV+LSLGMHWISNFVIGLYFLSVV KFGI
Sbjct: 412 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVTKFGI 471
Query: 456 SSVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIEHALSSSS 334
SSVYLGF+ VCVLAVLYIAGNVVETKGRSLEEIE AL SS
Sbjct: 472 SSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEIELALFVSS 512
>dbj|BAB64614.1| putative hexose transporter [Oryza sativa (japonica
cultivar-group)]
Length = 535
Score = 179 bits (454), Expect = 3e-44
Identities = 90/101 (89%), Positives = 98/101 (96%)
Frame = -2
Query: 636 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSLSLGMHWISNFVIGLYFLSVVNKFGI 457
TVLYVLSF+LGAGPVPALLLPEIFASRIRAKAV+LSLGMHW+SNF IGLYFLSVVNKFGI
Sbjct: 435 TVLYVLSFALGAGPVPALLLPEIFASRIRAKAVALSLGMHWVSNFFIGLYFLSVVNKFGI 494
Query: 456 SSVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIEHALSSSS 334
S+VYLGF++VC LAV+YIAGNVVETKGRSLEEIE ALSS+S
Sbjct: 495 STVYLGFASVCALAVVYIAGNVVETKGRSLEEIERALSSAS 535
>gb|AAO26330.1| putative sugar transporter [Brassica rapa subsp. pekinensis]
Length = 170
Score = 179 bits (453), Expect = 4e-44
Identities = 92/99 (92%), Positives = 96/99 (96%)
Frame = -2
Query: 636 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVSLSLGMHWISNFVIGLYFLSVVNKFGI 457
TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAV+LSLGMHWISNFVIGLYFLSVV KFGI
Sbjct: 71 TVLYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWISNFVIGLYFLSVVTKFGI 130
Query: 456 SSVYLGFSAVCVLAVLYIAGNVVETKGRSLEEIEHALSS 340
SSVYLGF+ VCVLAV+YIAGNVVETKGRSLEEIE AL+S
Sbjct: 131 SSVYLGFAGVCVLAVMYIAGNVVETKGRSLEEIELALTS 169
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,708,767
Number of Sequences: 1393205
Number of extensions: 10286519
Number of successful extensions: 29118
Number of sequences better than 10.0: 588
Number of HSP's better than 10.0 without gapping: 28193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28913
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
