Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003146A_C01 KMC003146A_c01
(475 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9S8P4|RHRE_PEA Rhicadhesin receptor precursor (Germin-like p... 124 4e-28
sp|Q94EG3|NEC1_NICLS Nectarin 1 precursor (Superoxide dismutase ... 115 3e-25
sp|Q9SPV5|NEC1_NICPL Nectarin 1 precursor (Superoxide dismutase ... 109 1e-23
gb|AAD38298.1|AC007789_24 putative oxalate oxidase (germin prote... 108 4e-23
gb|AAB51752.1| germin-like protein [Arabidopsis thaliana] 107 6e-23
>sp|Q9S8P4|RHRE_PEA Rhicadhesin receptor precursor (Germin-like protein)
gi|6689034|emb|CAB65369.1| germin-like protein [Pisum
sativum]
Length = 217
Score = 124 bits (312), Expect = 4e-28
Identities = 59/77 (76%), Positives = 67/77 (86%)
Frame = -3
Query: 473 KGEIFVFPKGLVHYQKNNGYWPASVISAFNSQLPGTVSIPLALFAAKPPVPDNVLTKAFQ 294
KGE FVFPKGLVH+QKNNG+ PA+VI+ FNSQLPGTV+IPL LF A PPVPDNVLTKAFQ
Sbjct: 141 KGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIPLTLFNATPPVPDNVLTKAFQ 200
Query: 293 TSTEEVEKIKANLAPKK 243
T+EV+KIK+ APKK
Sbjct: 201 IGTKEVQKIKSKFAPKK 217
>sp|Q94EG3|NEC1_NICLS Nectarin 1 precursor (Superoxide dismutase [Mn])
gi|15341550|gb|AAK95664.1|AF411917_1 nectarin I
[Nicotiana langsdorffii x Nicotiana sanderae]
Length = 229
Score = 115 bits (287), Expect = 3e-25
Identities = 53/77 (68%), Positives = 65/77 (83%)
Frame = -3
Query: 473 KGEIFVFPKGLVHYQKNNGYWPASVISAFNSQLPGTVSIPLALFAAKPPVPDNVLTKAFQ 294
KGE+FVFP+GLVH+QKNNG PA+VISAFNSQLPGT SIP+ LF A PPVPD+VL + FQ
Sbjct: 151 KGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQ 210
Query: 293 TSTEEVEKIKANLAPKK 243
+TE+V++IK+ AP K
Sbjct: 211 INTEDVQQIKSKFAPVK 227
>sp|Q9SPV5|NEC1_NICPL Nectarin 1 precursor (Superoxide dismutase [Mn])
gi|6090829|gb|AAF03355.1|AF132671_1 nectarin I precursor
[Nicotiana plumbaginifolia]
Length = 229
Score = 109 bits (273), Expect = 1e-23
Identities = 50/77 (64%), Positives = 63/77 (80%)
Frame = -3
Query: 473 KGEIFVFPKGLVHYQKNNGYWPASVISAFNSQLPGTVSIPLALFAAKPPVPDNVLTKAFQ 294
KGE+FVFP+GLVH+QKNNG PA+V+SAFNSQLPGT SIP+ LF A P VPD+VL + FQ
Sbjct: 151 KGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQ 210
Query: 293 TSTEEVEKIKANLAPKK 243
+ E+V++IK+ AP K
Sbjct: 211 INIEDVQQIKSKFAPAK 227
>gb|AAD38298.1|AC007789_24 putative oxalate oxidase (germin protein) [Oryza sativa (japonica
cultivar-group)] gi|11320856|dbj|BAB18339.1| putative
germin protein [Oryza sativa (japonica cultivar-group)]
Length = 227
Score = 108 bits (269), Expect = 4e-23
Identities = 52/77 (67%), Positives = 61/77 (78%)
Frame = -3
Query: 473 KGEIFVFPKGLVHYQKNNGYWPASVISAFNSQLPGTVSIPLALFAAKPPVPDNVLTKAFQ 294
+G++FVFP+GLVH+Q+N G PA+V+SAFNSQLPGT SI LFAA P VPD VL KAFQ
Sbjct: 150 QGDVFVFPRGLVHFQRNTGDKPAAVVSAFNSQLPGTQSIAATLFAASPAVPDAVLAKAFQ 209
Query: 293 TSTEEVEKIKANLAPKK 243
EEV+KIKA APKK
Sbjct: 210 IDDEEVDKIKAKFAPKK 226
>gb|AAB51752.1| germin-like protein [Arabidopsis thaliana]
Length = 204
Score = 107 bits (267), Expect = 6e-23
Identities = 53/78 (67%), Positives = 61/78 (77%), Gaps = 1/78 (1%)
Frame = -3
Query: 473 KGEIFVFPKGLVHYQKNNGYW-PASVISAFNSQLPGTVSIPLALFAAKPPVPDNVLTKAF 297
KGE+FVFP+GL+HYQKNN PASVISAFNSQLPGT SI LF A P +PD+VLT F
Sbjct: 126 KGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTF 185
Query: 296 QTSTEEVEKIKANLAPKK 243
Q T+E+EKIK+ APKK
Sbjct: 186 QIGTKEIEKIKSKFAPKK 203
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 417,958,390
Number of Sequences: 1393205
Number of extensions: 8797522
Number of successful extensions: 22538
Number of sequences better than 10.0: 167
Number of HSP's better than 10.0 without gapping: 21980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22505
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12815311608
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
