Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003020A_C01 KMC003020A_c01
(442 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK63248.1|AF367434_1 phosphatidylinositol transfer-like prot... 57 2e-17
gb|AAK64378.1|AF366901_1 phosphatidylinositol transfer-like prot... 55 1e-15
pir||G85430 hypothetical protein AT4g36490 [imported] - Arabidop... 50 7e-15
ref|NP_179410.1| putative phosphatidylinositol/phophatidylcholin... 50 7e-15
ref|NP_568006.1| expressed protein; protein id: At4g36490.1, sup... 50 7e-15
>gb|AAK63248.1|AF367434_1 phosphatidylinositol transfer-like protein IV [Lotus japonicus]
Length = 482
Score = 57.4 bits (137), Expect(2) = 2e-17
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 165 GLKSFNKHARELVTRIQKVDGDNYPE 242
GLKSFNKHARELVTRIQKVDGDNYPE
Sbjct: 202 GLKSFNKHARELVTRIQKVDGDNYPE 227
Score = 51.2 bits (121), Expect(2) = 2e-17
Identities = 23/24 (95%), Positives = 24/24 (99%)
Frame = +2
Query: 344 QTLNRMFIINAGSGFRILWNTVKS 415
+TLNRMFIINAGSGFRILWNTVKS
Sbjct: 227 ETLNRMFIINAGSGFRILWNTVKS 250
>gb|AAK64378.1|AF366901_1 phosphatidylinositol transfer-like protein II [Lotus japonicus]
Length = 550
Score = 54.7 bits (130), Expect(2) = 1e-15
Identities = 22/26 (84%), Positives = 26/26 (99%)
Frame = +3
Query: 165 GLKSFNKHARELVTRIQKVDGDNYPE 242
GLK+FNKHAREL+TR+QK+DGDNYPE
Sbjct: 207 GLKNFNKHARELITRLQKIDGDNYPE 232
Score = 48.1 bits (113), Expect(2) = 1e-15
Identities = 21/24 (87%), Positives = 24/24 (99%)
Frame = +2
Query: 344 QTLNRMFIINAGSGFRILWNTVKS 415
+TLNRMFIINAGSGFR+LW+TVKS
Sbjct: 232 ETLNRMFIINAGSGFRMLWSTVKS 255
>pir||G85430 hypothetical protein AT4g36490 [imported] - Arabidopsis thaliana
gi|4006913|emb|CAB16843.1| hypothetical protein
[Arabidopsis thaliana] gi|7270597|emb|CAB80315.1|
hypothetical protein [Arabidopsis thaliana]
Length = 558
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 22/24 (91%), Positives = 24/24 (99%)
Frame = +2
Query: 344 QTLNRMFIINAGSGFRILWNTVKS 415
+TLNRMFIINAGSGFR+LWNTVKS
Sbjct: 244 ETLNRMFIINAGSGFRMLWNTVKS 267
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 21/26 (80%), Positives = 25/26 (95%)
Frame = +3
Query: 165 GLKSFNKHARELVTRIQKVDGDNYPE 242
GLK+FNK AR+L+TR+QKVDGDNYPE
Sbjct: 219 GLKNFNKAARDLITRLQKVDGDNYPE 244
>ref|NP_179410.1| putative phosphatidylinositol/phophatidylcholine transfer protein;
protein id: At2g18180.1 [Arabidopsis thaliana]
gi|25411836|pir||C84561 hypothetical protein At2g18180
[imported] - Arabidopsis thaliana
gi|4874285|gb|AAD31348.1| putative
phosphatidylinositol/phophatidylcholine transfer protein
[Arabidopsis thaliana]
Length = 558
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 22/24 (91%), Positives = 24/24 (99%)
Frame = +2
Query: 344 QTLNRMFIINAGSGFRILWNTVKS 415
+TLNRMFIINAGSGFR+LWNTVKS
Sbjct: 232 ETLNRMFIINAGSGFRMLWNTVKS 255
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 21/26 (80%), Positives = 25/26 (95%)
Frame = +3
Query: 165 GLKSFNKHARELVTRIQKVDGDNYPE 242
GLK+FNK AR+L+TR+QKVDGDNYPE
Sbjct: 207 GLKNFNKAARDLITRLQKVDGDNYPE 232
>ref|NP_568006.1| expressed protein; protein id: At4g36490.1, supported by cDNA:
gi_15215779 [Arabidopsis thaliana]
gi|15215780|gb|AAK91435.1| C7A10_870/C7A10_870
[Arabidopsis thaliana] gi|23463079|gb|AAN33209.1|
At4g36490/C7A10_870 [Arabidopsis thaliana]
Length = 543
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 22/24 (91%), Positives = 24/24 (99%)
Frame = +2
Query: 344 QTLNRMFIINAGSGFRILWNTVKS 415
+TLNRMFIINAGSGFR+LWNTVKS
Sbjct: 229 ETLNRMFIINAGSGFRMLWNTVKS 252
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 21/26 (80%), Positives = 25/26 (95%)
Frame = +3
Query: 165 GLKSFNKHARELVTRIQKVDGDNYPE 242
GLK+FNK AR+L+TR+QKVDGDNYPE
Sbjct: 204 GLKNFNKAARDLITRLQKVDGDNYPE 229
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 353,792,512
Number of Sequences: 1393205
Number of extensions: 6799172
Number of successful extensions: 14247
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 14061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14245
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 6689237688
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
