Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002993A_C01 KMC002993A_c01
(565 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175660.2| hypothetical protein; protein id: At1g52510.1, ... 204 6e-52
pir||F96565 hypothetical protein F6D8.27 [imported] - Arabidopsi... 204 6e-52
ref|NP_440441.1| unknown protein [Synechocystis sp. PCC 6803] gi... 86 4e-16
gb|ZP_00112083.1| hypothetical protein [Nostoc punctiforme] 82 4e-15
ref|NP_485396.1| putative hydrolase [Nostoc sp. PCC 7120] gi|255... 81 1e-14
>ref|NP_175660.2| hypothetical protein; protein id: At1g52510.1, supported by cDNA:
gi_17528995 [Arabidopsis thaliana]
gi|17528996|gb|AAL38708.1| unknown protein [Arabidopsis
thaliana] gi|21436161|gb|AAM51368.1| unknown protein
[Arabidopsis thaliana]
Length = 380
Score = 204 bits (519), Expect = 6e-52
Identities = 94/124 (75%), Positives = 109/124 (87%)
Frame = -2
Query: 561 QNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEGF 382
QNAI+AERFIE GSPYVLKNEKADVYRLPYLSS GPGFALLE A+K NF T S+I+ GF
Sbjct: 257 QNAILAERFIEGGSPYVLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGF 316
Query: 381 ATGRWDKPVVLVWGISDKYLPQSVAEEFQKGNTEHIKLKLIEGAGHMPQEDWPEKVVEAL 202
++G WDKP +L WGI+DKYLPQS+AEEF+K N +++KL+LIEGAGH+PQEDWPEKVV AL
Sbjct: 317 SSGSWDKPTLLAWGIADKYLPQSIAEEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAAL 376
Query: 201 RFFF 190
R FF
Sbjct: 377 RAFF 380
>pir||F96565 hypothetical protein F6D8.27 [imported] - Arabidopsis thaliana
gi|5903052|gb|AAD55611.1|AC008016_21 Contains PF|00561
alpha/beta hydrolase fold. [Arabidopsis thaliana]
Length = 379
Score = 204 bits (519), Expect = 6e-52
Identities = 94/124 (75%), Positives = 109/124 (87%)
Frame = -2
Query: 561 QNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEGF 382
QNAI+AERFIE GSPYVLKNEKADVYRLPYLSS GPGFALLE A+K NF T S+I+ GF
Sbjct: 256 QNAILAERFIEGGSPYVLKNEKADVYRLPYLSSGGPGFALLETAKKINFGDTLSQIANGF 315
Query: 381 ATGRWDKPVVLVWGISDKYLPQSVAEEFQKGNTEHIKLKLIEGAGHMPQEDWPEKVVEAL 202
++G WDKP +L WGI+DKYLPQS+AEEF+K N +++KL+LIEGAGH+PQEDWPEKVV AL
Sbjct: 316 SSGSWDKPTLLAWGIADKYLPQSIAEEFEKQNPQNVKLRLIEGAGHLPQEDWPEKVVAAL 375
Query: 201 RFFF 190
R FF
Sbjct: 376 RAFF 379
>ref|NP_440441.1| unknown protein [Synechocystis sp. PCC 6803] gi|7470579|pir||S75207
hypothetical protein slr2053 - Synechocystis sp. (strain
PCC 6803) gi|1652197|dbj|BAA17121.1|
ORF_ID:slr2053~unknown protein [Synechocystis sp. PCC
6803]
Length = 283
Score = 85.5 bits (210), Expect = 4e-16
Identities = 43/125 (34%), Positives = 71/125 (56%)
Frame = -2
Query: 564 SQNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEG 385
+Q+ +I +R +E GS +V+ +EK D+YR P+L +S G AL+ + ++I +
Sbjct: 156 TQDPLIIDRTLEGGSGFVISDEKLDIYRKPWLKTSAAGRALMAVTKNLPTTNALTKIGDR 215
Query: 384 FATGRWDKPVVLVWGISDKYLPQSVAEEFQKGNTEHIKLKLIEGAGHMPQEDWPEKVVEA 205
T W KP +WG +DK+L E+ +G H++L + A H PQE +P++V A
Sbjct: 216 LRT-EWQKPTCFIWGTADKWLSVEPIEQLVQG-VNHLELIKLSEAKHYPQEHFPQEVGTA 273
Query: 204 LRFFF 190
L+ FF
Sbjct: 274 LQTFF 278
>gb|ZP_00112083.1| hypothetical protein [Nostoc punctiforme]
Length = 283
Score = 82.4 bits (202), Expect = 4e-15
Identities = 43/123 (34%), Positives = 70/123 (55%), Gaps = 2/123 (1%)
Frame = -2
Query: 564 SQNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEG 385
+Q+ ++ +R +E GS Y + +++ D+YR P+L SS G +LL + R +EI G
Sbjct: 156 TQDPLLVDRTLEGGSRYRIGDKELDIYRKPFLKSSSSGRSLLSSIRNLQLDSAMTEIESG 215
Query: 384 FATGRWDKPVVLVWGISDKYLPQSVAEEFQKG--NTEHIKLKLIEGAGHMPQEDWPEKVV 211
F W +P+++ WG+ D +L +A++F NTE IKL GH PQE + E ++
Sbjct: 216 FK--EWQQPILIQWGMIDPWLSVDIAQKFTDSAPNTELIKL---NNVGHYPQEHYHEVIL 270
Query: 210 EAL 202
E L
Sbjct: 271 EDL 273
>ref|NP_485396.1| putative hydrolase [Nostoc sp. PCC 7120] gi|25532900|pir||AF1975
hypothetical protein all1353 [imported] - Nostoc sp.
(strain PCC 7120) gi|17130700|dbj|BAB73310.1|
ORF_ID:all1353~putative hydrolase [Nostoc sp. PCC 7120]
Length = 282
Score = 80.9 bits (198), Expect = 1e-14
Identities = 43/123 (34%), Positives = 71/123 (56%), Gaps = 2/123 (1%)
Frame = -2
Query: 564 SQNAIIAERFIEAGSPYVLKNEKADVYRLPYLSSSGPGFALLEAARKTNFKGTFSEISEG 385
+Q+ ++ +R +E GS Y ++++ D+YR P+L +S G ALL R +EI G
Sbjct: 156 TQDPLLIDRTLEGGSRYRIEDKDLDIYRKPFLKTSAVGRALLNTIRNLQLPVAMTEIESG 215
Query: 384 FATGRWDKPVVLVWGISDKYLPQSVAEEFQK--GNTEHIKLKLIEGAGHMPQEDWPEKVV 211
F +W +P+++ WG+ D +LP VA++F + N E IKL GH PQE + + ++
Sbjct: 216 FK--QWQQPILVQWGMIDPWLPVEVAQKFVETAPNAELIKL---NNVGHYPQEHYDKTIL 270
Query: 210 EAL 202
E L
Sbjct: 271 EDL 273
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,842,071
Number of Sequences: 1393205
Number of extensions: 9059649
Number of successful extensions: 27366
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 26735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27342
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
