Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002981A_C01 KMC002981A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM13204.1| putative serine protease-like protein [Arabidopsi... 122 6e-44
gb|AAO72617.1| putative serine protease-like protein [Oryza sati... 115 1e-39
ref|NP_193443.1| putative serine protease-like protein; protein ... 74 8e-26
emb|CAD45344.1| endoU protein [Xenopus laevis] 67 8e-15
ref|NP_006016.1| placental protein 11 precursor [Homo sapiens] g... 58 7e-10
>gb|AAM13204.1| putative serine protease-like protein [Arabidopsis thaliana]
gi|23197988|gb|AAN15521.1| putative serine protease-like
protein [Arabidopsis thaliana]
Length = 434
Score = 122 bits (306), Expect(2) = 6e-44
Identities = 57/60 (95%), Positives = 58/60 (96%)
Frame = -2
Query: 566 HNWLQFYLEEPKGRVDYQGYLFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 387
HNWLQFYLEE KG VDYQGY+FPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPE
Sbjct: 328 HNWLQFYLEEAKGTVDYQGYIFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 387
Score = 77.0 bits (188), Expect(2) = 6e-44
Identities = 34/44 (77%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Frame = -3
Query: 385 FEIALYTLCFYAGEEDNHIQLGPYEINVKCYRLG-ERIGSVFPI 257
FE+ALYT+CF+ G EDNHIQLGPY +NVKCYRLG RIGS FPI
Sbjct: 388 FELALYTMCFFMGTEDNHIQLGPYNVNVKCYRLGNNRIGSAFPI 431
>gb|AAO72617.1| putative serine protease-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 303
Score = 115 bits (288), Expect(2) = 1e-39
Identities = 52/60 (86%), Positives = 56/60 (92%)
Frame = -2
Query: 566 HNWLQFYLEEPKGRVDYQGYLFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 387
HNW+QFYLEE G VDYQGY+FPRRRGE PDSETQLLTIQFEW+GVLKSVSSTL+GVSPE
Sbjct: 197 HNWIQFYLEEANGNVDYQGYIFPRRRGESPDSETQLLTIQFEWHGVLKSVSSTLIGVSPE 256
Score = 69.3 bits (168), Expect(2) = 1e-39
Identities = 28/44 (63%), Positives = 37/44 (83%), Gaps = 1/44 (2%)
Frame = -3
Query: 385 FEIALYTLCFYAGEEDNHIQLGPYEINVKCYRLG-ERIGSVFPI 257
FE+ALYTLCF+ G EDN +++GPY +N+KCYR+G +IGS FPI
Sbjct: 257 FEVALYTLCFFMGGEDNRVEIGPYGVNIKCYRMGNSKIGSAFPI 300
>ref|NP_193443.1| putative serine protease-like protein; protein id: At4g17100.1
[Arabidopsis thaliana] gi|25407557|pir||A85191 probable
serine proteinase-like protein [imported] - Arabidopsis
thaliana gi|5302811|emb|CAB46052.1| putative serine
protease-like protein [Arabidopsis thaliana]
gi|7268461|emb|CAB80981.1| putative serine protease-like
protein [Arabidopsis thaliana]
Length = 407
Score = 73.9 bits (180), Expect(2) = 8e-26
Identities = 35/55 (63%), Positives = 41/55 (73%), Gaps = 1/55 (1%)
Frame = -3
Query: 385 FEIALYTLCFYAGEEDNHIQLGPYEINVKCYRLG-ERIGSVFPIPRVLNFQLQAI 224
FE+ALYT+CF+ G EDNHIQLGPY +NVKCYRLG RI FP R+L L A+
Sbjct: 338 FELALYTMCFFMGTEDNHIQLGPYNVNVKCYRLGNNRIALSFPHCRILKPLLMAL 392
Score = 64.7 bits (156), Expect(2) = 8e-26
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -2
Query: 479 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 387
PDSETQLLTIQFEWNGVLKSVSSTLVGVSPE
Sbjct: 307 PDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 337
>emb|CAD45344.1| endoU protein [Xenopus laevis]
Length = 292
Score = 67.4 bits (163), Expect(2) = 8e-15
Identities = 28/60 (46%), Positives = 42/60 (69%)
Frame = -2
Query: 566 HNWLQFYLEEPKGRVDYQGYLFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 387
HNW+QFYL+E + +DY+GY+ R+ PD + Q+L +QF W ++K V S+ +GVSPE
Sbjct: 178 HNWVQFYLQEKRKNIDYKGYV-ARQNKSRPDEDDQVLNLQFNWKEMVKPVGSSFIGVSPE 236
Score = 34.3 bits (77), Expect(2) = 8e-15
Identities = 17/46 (36%), Positives = 26/46 (55%), Gaps = 3/46 (6%)
Frame = -3
Query: 385 FEIALYTLCFYAGEEDNH---IQLGPYEINVKCYRLGERIGSVFPI 257
FE ALYT+ F A +E ++L YE+ + R G IG+ +P+
Sbjct: 237 FEFALYTIVFLASQEKMSREVVRLEEYELQIVVNRHGRYIGTAYPV 282
>ref|NP_006016.1| placental protein 11 precursor [Homo sapiens]
gi|130696|sp|P21128|PP11_HUMAN Placental protein 11
precursor (PP11) gi|107308|pir||A34614 placental protein
11 precursor - human gi|190211|gb|AAA36464.1| placental
protein 11 (PP11) precursor gi|190213|gb|AAA36465.1|
placental protein 11
Length = 369
Score = 58.2 bits (139), Expect(2) = 7e-10
Identities = 26/60 (43%), Positives = 36/60 (59%)
Frame = -2
Query: 566 HNWLQFYLEEPKGRVDYQGYLFPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPE 387
HNW++FYLEE +G VDY +++ PD +L +QF W+G K V S +G SPE
Sbjct: 259 HNWIRFYLEEKEGLVDYYSHIYDGPWDSYPD----VLAMQFNWDGYYKEVGSAFIGSSPE 314
Score = 26.6 bits (57), Expect(2) = 7e-10
Identities = 14/32 (43%), Positives = 19/32 (58%), Gaps = 1/32 (3%)
Frame = -3
Query: 385 FEIALYTLCFYAGE-EDNHIQLGPYEINVKCY 293
FE ALY+LCF A + + LG Y + V+ Y
Sbjct: 315 FEFALYSLCFIARPGKVCQLSLGGYPLAVRTY 346
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,789,580
Number of Sequences: 1393205
Number of extensions: 8634412
Number of successful extensions: 17591
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 17262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17579
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
