Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002876A_C01 KMC002876A_c01
(698 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM00197.1|AF356352_1 acid phosphatase [Oryza sativa] 89 3e-22
emb|CAD30328.1| acid phosphatase [Lupinus luteus] 102 7e-21
ref|NP_198334.1| acid phosphatase-like protein; protein id: At5g... 100 3e-20
dbj|BAB60719.1| PEP phosphatase [Allium cepa] 82 3e-18
pir||T51094 acid phosphatase (EC 3.1.3.2) purple 1, precursor [s... 79 8e-14
>gb|AAM00197.1|AF356352_1 acid phosphatase [Oryza sativa]
Length = 476
Score = 89.4 bits (220), Expect(2) = 3e-22
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = -2
Query: 697 ASRFMDPQPEYSAFREASFGHSTLDIKNRTHAVYHWNRNDDGKKVPTD 554
ASRF DPQP+YSAFREAS+GHS L +KNRTHA+Y WNRNDDGK VP D
Sbjct: 394 ASRFSDPQPDYSAFREASYGHSILQLKNRTHAIYQWNRNDDGKHVPAD 441
Score = 38.1 bits (87), Expect(2) = 3e-22
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -3
Query: 546 VLHNQYWGSNRRRRKL-NKHLLLTVIDEVVSM 454
V HNQYW SN RRR+L KH L I++++S+
Sbjct: 444 VFHNQYWASNTRRRRLKKKHFHLDQIEDLISV 475
>emb|CAD30328.1| acid phosphatase [Lupinus luteus]
Length = 477
Score = 102 bits (253), Expect = 7e-21
Identities = 46/65 (70%), Positives = 52/65 (79%)
Frame = -2
Query: 697 ASRFMDPQPEYSAFREASFGHSTLDIKNRTHAVYHWNRNDDGKKVPTDFFRIA*PVLGKQ 518
ASRF DPQPEYSAFREAS+GHSTL+IKNRTHA+YHWNRNDDGKKVP D F + G
Sbjct: 397 ASRFTDPQPEYSAFREASYGHSTLEIKNRTHAIYHWNRNDDGKKVPIDSFILYNQYWGSN 456
Query: 517 SEKKK 503
++K
Sbjct: 457 RRRRK 461
Score = 60.1 bits (144), Expect = 3e-08
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = -3
Query: 570 RKCQLTSFVLHNQYWGSNRRRRKLNKHLLLTVIDEVVSM 454
+K + SF+L+NQYWGSNRRRRKL K+ L+T++DE VSM
Sbjct: 439 KKVPIDSFILYNQYWGSNRRRRKLKKNFLMTLVDEAVSM 477
>ref|NP_198334.1| acid phosphatase-like protein; protein id: At5g34850.1, supported
by cDNA: gi_20259672 [Arabidopsis thaliana]
gi|15292757|gb|AAK92747.1| putative acid phosphatase
[Arabidopsis thaliana] gi|20259673|gb|AAM14354.1|
putative acid phosphatase [Arabidopsis thaliana]
Length = 475
Score = 99.8 bits (247), Expect = 3e-20
Identities = 45/65 (69%), Positives = 52/65 (79%)
Frame = -2
Query: 697 ASRFMDPQPEYSAFREASFGHSTLDIKNRTHAVYHWNRNDDGKKVPTDFFRIA*PVLGKQ 518
A RF +PQP+YSAFREAS+GHSTLDIKNRTHA+YHWNRNDDGKKV TD F + GK
Sbjct: 395 AGRFTEPQPDYSAFREASYGHSTLDIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGKN 454
Query: 517 SEKKK 503
++K
Sbjct: 455 IRRRK 459
Score = 45.8 bits (107), Expect = 6e-04
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -3
Query: 570 RKCQLTSFVLHNQYWGSNRRRRKLNKHLLLTVI 472
+K FVLHNQYWG N RRRKL KH + +V+
Sbjct: 437 KKVATDEFVLHNQYWGKNIRRRKLKKHYIRSVV 469
>dbj|BAB60719.1| PEP phosphatase [Allium cepa]
Length = 481
Score = 82.0 bits (201), Expect(2) = 3e-18
Identities = 33/48 (68%), Positives = 41/48 (84%)
Frame = -2
Query: 697 ASRFMDPQPEYSAFREASFGHSTLDIKNRTHAVYHWNRNDDGKKVPTD 554
A RF + QP+YSAFRE+S+GHSTL+++NRTHA Y WNRNDDGK +P D
Sbjct: 400 AERFSESQPDYSAFRESSYGHSTLELRNRTHAFYQWNRNDDGKHIPVD 447
Score = 31.6 bits (70), Expect(2) = 3e-18
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 546 VLHNQYWGSNRRRRKLNKHLLLTVIDEVVS 457
+ NQYW SN RRR+L K ++ ++S
Sbjct: 450 IFRNQYWASNTRRRRLKKTRPSQAVERLIS 479
>pir||T51094 acid phosphatase (EC 3.1.3.2) purple 1, precursor [similarity] -
sweet potato gi|4160280|emb|CAA06921.1| purple acid
phosphatase [Ipomoea batatas]
Length = 465
Score = 78.6 bits (192), Expect = 8e-14
Identities = 35/48 (72%), Positives = 38/48 (78%)
Frame = -2
Query: 697 ASRFMDPQPEYSAFREASFGHSTLDIKNRTHAVYHWNRNDDGKKVPTD 554
A+ DPQPEYSAFREASFGH+TLDIKNRTHA Y W+RN DG V D
Sbjct: 398 ATNMTDPQPEYSAFREASFGHATLDIKNRTHAYYSWHRNQDGYAVEAD 445
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 599,091,589
Number of Sequences: 1393205
Number of extensions: 12629166
Number of successful extensions: 27914
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 27216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27907
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31967457276
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
