Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002810A_C01 KMC002810A_c01
(554 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176279.1| receptor-like kinase, putative; protein id: At1... 61 3e-13
pir||E96633 probable Serine/Threonine protein kinase F8A5.31 [im... 61 3e-13
ref|NP_197104.1| receptor protein kinase-like protein; protein i... 53 5e-11
ref|NP_189183.2| somatic embryogenesis receptor-like kinase, put... 54 5e-11
dbj|BAB01326.1| receptor-like kinase [Arabidopsis thaliana] 54 5e-11
>ref|NP_176279.1| receptor-like kinase, putative; protein id: At1g60800.1
[Arabidopsis thaliana] gi|15810511|gb|AAL07143.1|
putative receptor kinase [Arabidopsis thaliana]
gi|23297726|gb|AAN12912.1| putative receptor kinase
[Arabidopsis thaliana]
Length = 632
Score = 61.2 bits (147), Expect(2) = 3e-13
Identities = 30/48 (62%), Positives = 36/48 (74%), Gaps = 3/48 (6%)
Frame = -1
Query: 554 CTQSNPTTRPPMSEVLKMLEGDGLAERWEASQS---QRIETPQVPGLV 420
CTQ NP+ RP MSEV+KMLEGDGLAERWEA+Q+ + P PG+V
Sbjct: 556 CTQFNPSHRPKMSEVMKMLEGDGLAERWEATQNGTGEHQPPPLPPGMV 603
Score = 35.0 bits (79), Expect(2) = 3e-13
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -3
Query: 402 YADLIEESSLIVEAMELSGP 343
Y+D I+ESSL+VEA+ELSGP
Sbjct: 612 YSDYIQESSLVVEAIELSGP 631
>pir||E96633 probable Serine/Threonine protein kinase F8A5.31 [imported] -
Arabidopsis thaliana gi|2462749|gb|AAB71968.1| Putative
Serine/Threonine protein kinase [Arabidopsis thaliana]
Length = 588
Score = 61.2 bits (147), Expect(2) = 3e-13
Identities = 30/48 (62%), Positives = 36/48 (74%), Gaps = 3/48 (6%)
Frame = -1
Query: 554 CTQSNPTTRPPMSEVLKMLEGDGLAERWEASQS---QRIETPQVPGLV 420
CTQ NP+ RP MSEV+KMLEGDGLAERWEA+Q+ + P PG+V
Sbjct: 512 CTQFNPSHRPKMSEVMKMLEGDGLAERWEATQNGTGEHQPPPLPPGMV 559
Score = 35.0 bits (79), Expect(2) = 3e-13
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -3
Query: 402 YADLIEESSLIVEAMELSGP 343
Y+D I+ESSL+VEA+ELSGP
Sbjct: 568 YSDYIQESSLVVEAIELSGP 587
>ref|NP_197104.1| receptor protein kinase-like protein; protein id: At5g16000.1,
supported by cDNA: 40594., supported by cDNA:
gi_18377619 [Arabidopsis thaliana]
gi|11358751|pir||T51383 receptor protein kinase-like
protein - Arabidopsis thaliana
gi|9755646|emb|CAC01799.1| receptor protein kinase-like
protein [Arabidopsis thaliana]
gi|18377620|gb|AAL66960.1| putative receptor protein
kinase [Arabidopsis thaliana] gi|26983894|gb|AAN86199.1|
putative receptor protein kinase [Arabidopsis thaliana]
Length = 638
Score = 52.8 bits (125), Expect(2) = 5e-11
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = -1
Query: 554 CTQSNPTTRPPMSEVLKMLEGDGLAERWEASQ 459
CTQ P RP MSEV++MLEGDGLAE+WEASQ
Sbjct: 565 CTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQ 596
Score = 35.8 bits (81), Expect(2) = 5e-11
Identities = 15/21 (71%), Positives = 20/21 (94%)
Frame = -3
Query: 405 RYADLIEESSLIVEAMELSGP 343
RY+DL ++SSL+V+AMELSGP
Sbjct: 617 RYSDLTDDSSLLVQAMELSGP 637
>ref|NP_189183.2| somatic embryogenesis receptor-like kinase, putative; protein id:
At3g25560.1, supported by cDNA: gi_19715614 [Arabidopsis
thaliana] gi|19715615|gb|AAL91629.1| AT3g25560/MWL2_18
[Arabidopsis thaliana] gi|27363232|gb|AAO11535.1|
At3g25560/MWL2_18 [Arabidopsis thaliana]
Length = 635
Score = 53.9 bits (128), Expect(2) = 5e-11
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -1
Query: 554 CTQSNPTTRPPMSEVLKMLEGDGLAERWEASQSQRIET 441
CTQ P RP MSEV++MLEGDGL E+WEAS SQR ET
Sbjct: 563 CTQYLPIHRPKMSEVVRMLEGDGLVEKWEAS-SQRAET 599
Score = 34.7 bits (78), Expect(2) = 5e-11
Identities = 14/21 (66%), Positives = 20/21 (94%)
Frame = -3
Query: 405 RYADLIEESSLIVEAMELSGP 343
RY+DL ++SS++V+AMELSGP
Sbjct: 614 RYSDLTDDSSVLVQAMELSGP 634
>dbj|BAB01326.1| receptor-like kinase [Arabidopsis thaliana]
Length = 630
Score = 53.9 bits (128), Expect(2) = 5e-11
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = -1
Query: 554 CTQSNPTTRPPMSEVLKMLEGDGLAERWEASQSQRIET 441
CTQ P RP MSEV++MLEGDGL E+WEAS SQR ET
Sbjct: 558 CTQYLPIHRPKMSEVVRMLEGDGLVEKWEAS-SQRAET 594
Score = 34.7 bits (78), Expect(2) = 5e-11
Identities = 14/21 (66%), Positives = 20/21 (94%)
Frame = -3
Query: 405 RYADLIEESSLIVEAMELSGP 343
RY+DL ++SS++V+AMELSGP
Sbjct: 609 RYSDLTDDSSVLVQAMELSGP 629
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,146,485
Number of Sequences: 1393205
Number of extensions: 10052888
Number of successful extensions: 24110
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 23353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24100
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
