>KMC002768A_C01 KMC002768A_c01
aaacattattctggttaataagtACTGATTCATCTTTCAGAGAACCATTATTTACATCTA
AAACGACAACACAAATAAAAAGATATAGTAATAAATAAATACGTTTGCACGTTTGAATTT
TCCCACTTTTAGGTTGTCGCTGCAGACATGGGTTCTGCCTGAAACTGCGATCAGCACTCA
CCGAATGGTATTATAAATAGCCAATGTAGATGATACAAGAACAGAGATCTCTAAGTAAAC
AATAATGAAACAGAGATCTCTATAGGTTAATTTACCATACAACATAAAAGGTCATGTGAT
CAACAGATCCGGATTCCATGCAGTCAAAACTTTCTGAAGTCATTTGGGTAGTCGTCGAAT
CAAGATCGAATCGTTGGGATTTAAAATGACAATCATACGCAATGGGTCTTTATAAATTTA
AACCGTCTAATTAAAGATCGGATGGCTATGAAGCCATGAC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002768A_C01 KMC002768A_c01
         (460 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_775717.1| NADH dehydrogenase subunit 6 [Melipona bicolor]...    32  4.1

>ref|NP_775717.1| NADH dehydrogenase subunit 6 [Melipona bicolor]
           gi|27544851|gb|AAO18421.1|AF466146_11 NADH dehydrogenase
           subunit 6 [Melipona bicolor]
          Length = 179

 Score = 31.6 bits (70), Expect = 4.1
 Identities = 27/98 (27%), Positives = 50/98 (50%), Gaps = 8/98 (8%)
 Frame = -2

Query: 270 LTYRDLCFIIVYLEISVLVSSTLAIYNTIR*VLIAVSGRT-----HVCSDNL---KVGKF 115
           L  + + F I+   +  +++  L +YN +  ++I +SG        +C  NL   K+ KF
Sbjct: 40  LMIKFIIFTIISSILIYMINPHLILYNYMT-LIIMISGMMILFSYFICLINLEKKKMNKF 98

Query: 114 KRANVFIYYYIFLFVLSF*M*IMVL*KMNQYLLTRIMF 1
           K    FIY +I+LF++S    +++  K+N  L    M+
Sbjct: 99  K----FIYLFIYLFIISL---MIMYIKLNNMLFNFKMY 129

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 353,505,474
Number of Sequences: 1393205
Number of extensions: 6710606
Number of successful extensions: 17797
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17774
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11706011480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MRL019b06_f BP084674 1 460 2 GNLf009f12 BP075352 24 445

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