Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002763A_C02 KMC002763A_c02
(524 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199948.1| leucine-rich repeat transmembrane protein kinas... 80 1e-14
pir||A96574 protein F12M16.30 [imported] - Arabidopsis thaliana ... 50 1e-05
ref|NP_175747.1| leucine-rich repeat transmembrane protein kinas... 50 1e-05
gb|AAM91884.1| putative receptor-like protein kinase [Oryza sati... 50 2e-05
ref|NP_194594.1| leucine-rich repeat transmembrane protein kinas... 50 2e-05
>ref|NP_199948.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g51350.1 [Arabidopsis thaliana]
gi|9759281|dbj|BAB09746.1| receptor protein kinase-like
[Arabidopsis thaliana]
Length = 895
Score = 80.5 bits (197), Expect = 1e-14
Identities = 48/116 (41%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Frame = -1
Query: 524 GLKHVLNLSKGLSTTTTKQETEYNEAMKEQLCMDVYKFGEIVLEILTGGRLTSAAA-SLH 348
G K++L+L+ + N+ ++ + DVY FG+++LEILT G+L +A +
Sbjct: 783 GFKYMLHLNTD----------QMNDVIRVEKQKDVYNFGQLILEILTNGKLMNAGGLMIQ 832
Query: 347 SKSWEVLLREVCNYNEMSSASSLQ-EIKLVLEVAMLCTRSRSTDRPSIEEALKLLS 183
+K + LLREV NE+SS+ Q E+K V+EVA+LC RS +DRP +E+AL+LLS
Sbjct: 833 NKPKDGLLREVYTENEVSSSDFKQGEVKRVVEVALLCIRSDQSDRPCMEDALRLLS 888
>pir||A96574 protein F12M16.30 [imported] - Arabidopsis thaliana
gi|7769864|gb|AAF69542.1|AC008007_17 F12M16.30
[Arabidopsis thaliana]
Length = 854
Score = 50.4 bits (119), Expect = 1e-05
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Frame = -1
Query: 425 DVYKFGEIVLEILTGGRLT---SAAASLHSKSWEVLLREVCNYNEM-----SSASSLQEI 270
DVY FG + LEI+ G S + + W +LRE N E+ S + +E
Sbjct: 709 DVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEA 768
Query: 269 KLVLEVAMLCTRSRSTDRPSIEEALKLLSGLKRIE 165
++++A++CT S +RPS+ E +K+L G K +E
Sbjct: 769 MTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVE 803
>ref|NP_175747.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g53420.1 [Arabidopsis thaliana]
Length = 924
Score = 50.4 bits (119), Expect = 1e-05
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Frame = -1
Query: 425 DVYKFGEIVLEILTGGRLT---SAAASLHSKSWEVLLREVCNYNEM-----SSASSLQEI 270
DVY FG + LEI+ G S + + W +LRE N E+ S + +E
Sbjct: 779 DVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEA 838
Query: 269 KLVLEVAMLCTRSRSTDRPSIEEALKLLSGLKRIE 165
++++A++CT S +RPS+ E +K+L G K +E
Sbjct: 839 MTMIQIAIMCTSSEPCERPSMSEVVKMLEGKKMVE 873
>gb|AAM91884.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 373
Score = 50.1 bits (118), Expect = 2e-05
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Frame = -1
Query: 428 MDVYKFGEIVLEILTGGRLTSAAASLHSK---SWEVLLREVCNYNEMSSAS------SLQ 276
+D Y FG +VLEI++G +L A S+ W L E N E+ S + +
Sbjct: 237 VDTYSFGVVVLEIISGRKLNDARLDPDSQYLLEWAWKLYENNNLIELVDKSLDPKEYNPE 296
Query: 275 EIKLVLEVAMLCTRSRSTDRPSIEEALKLL 186
E+K ++++A+LCT+S RP++ E + LL
Sbjct: 297 EVKKIIQIALLCTQSAVASRPTMSEVVVLL 326
>ref|NP_194594.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g28650.1 [Arabidopsis thaliana]
gi|7434423|pir||T10659 probable serine/threonine-specific
protein kinase (EC 2.7.1.-) T5F17.100 - Arabidopsis
thaliana gi|7269720|emb|CAB81453.1| receptor protein
kinase-like protein [Arabidopsis thaliana]
Length = 1013
Score = 50.1 bits (118), Expect = 2e-05
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Frame = -1
Query: 461 EYNEAMKEQLCMDVYKFGEIVLEILTGGRLTSA--AASLHSKSW-------EVLLREVCN 309
EY +K +D+Y +G ++LE+LTG R S+ W + L E +
Sbjct: 876 EYGYTLKVDEKIDIYSYGVVLLELLTGRRPLEPEFGESVDIVEWVRRKIRDNISLEEALD 935
Query: 308 YNEMSSASSLQEIKLVLEVAMLCTRSRSTDRPSIEEALKLLSGLK 174
N + +E+ LVL++A+LCT DRPS+ + + +L K
Sbjct: 936 PNVGNCRYVQEEMLLVLQIALLCTTKLPKDRPSMRDVISMLGEAK 980
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,511,109
Number of Sequences: 1393205
Number of extensions: 7694829
Number of successful extensions: 19042
Number of sequences better than 10.0: 962
Number of HSP's better than 10.0 without gapping: 18009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18392
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
