Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002756A_C01 KMC002756A_c01
(635 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||F96673 hypothetical protein F13O11.30 [imported] - Arabidop... 80 2e-14
ref|NP_176681.1| hypothetical protein; protein id: At1g65010.1 [... 80 2e-14
ref|NP_197175.1| putative protein; protein id: At5g16730.1 [Arab... 77 2e-13
ref|NP_186943.1| unknown protein; protein id: At3g02930.1 [Arabi... 69 7e-11
ref|NP_680744.1| hypothetical protein; protein id: At4g27595.1 [... 56 5e-07
>pir||F96673 hypothetical protein F13O11.30 [imported] - Arabidopsis thaliana
gi|5042434|gb|AAD38273.1|AC006193_29 Hypothetical protein
[Arabidopsis thaliana]
Length = 1313
Score = 80.1 bits (196), Expect = 2e-14
Identities = 47/96 (48%), Positives = 64/96 (65%), Gaps = 1/96 (1%)
Frame = -2
Query: 595 EKSDSVEGEFKMWESCTIEKKEFSPERVPKPVSYEEEEVESKKEDSVGVEQI-NGGSVTE 419
E++ E EFKMW+S IEK E SPER + + EEEV+SK E S ++Q NG S+T+
Sbjct: 1215 ERNVEKESEFKMWDSYKIEKSEVSPERETE-LDSVEEEVDSKAESSENMDQYSNGFSLTD 1273
Query: 418 NIDNGGSSPSKQQVKKKKKALLVKFGSLLKKKGGSN 311
+ ++ G+ K+Q KKKK LL KFG+LLKKK S+
Sbjct: 1274 HTEDSGNLLLKEQHMKKKKPLLRKFGNLLKKKSTSS 1309
>ref|NP_176681.1| hypothetical protein; protein id: At1g65010.1 [Arabidopsis thaliana]
Length = 1318
Score = 80.1 bits (196), Expect = 2e-14
Identities = 47/96 (48%), Positives = 64/96 (65%), Gaps = 1/96 (1%)
Frame = -2
Query: 595 EKSDSVEGEFKMWESCTIEKKEFSPERVPKPVSYEEEEVESKKEDSVGVEQI-NGGSVTE 419
E++ E EFKMW+S IEK E SPER + + EEEV+SK E S ++Q NG S+T+
Sbjct: 1220 ERNVEKESEFKMWDSYKIEKSEVSPERETE-LDSVEEEVDSKAESSENMDQYSNGFSLTD 1278
Query: 418 NIDNGGSSPSKQQVKKKKKALLVKFGSLLKKKGGSN 311
+ ++ G+ K+Q KKKK LL KFG+LLKKK S+
Sbjct: 1279 HTEDSGNLLLKEQHMKKKKPLLRKFGNLLKKKSTSS 1314
>ref|NP_197175.1| putative protein; protein id: At5g16730.1 [Arabidopsis thaliana]
gi|11357813|pir||T51505 hypothetical protein F5E19_70 -
Arabidopsis thaliana gi|9755725|emb|CAC01837.1| putative
protein [Arabidopsis thaliana]
Length = 853
Score = 76.6 bits (187), Expect = 2e-13
Identities = 52/113 (46%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Frame = -2
Query: 619 KLKEDESRE--KSDSVEGEFKMWESCTIEKKEFSPERVPKPVSYEEEEVESKKEDSVGVE 446
K K+DES++ K DSVE FKMWESC IEKKE P++ + S EEEE SK ++S
Sbjct: 748 KEKKDESQDDDKDDSVEVIFKMWESCQIEKKEAFPDKKSELESQEEEEDSSKIDES---- 803
Query: 445 QINGGSVTENIDNGGSS------PSKQQVKKKKKALLVKFGSLLKKKGGSNHK 305
+ TENID G++ + ++ KKKK LL K G+LLKKK N K
Sbjct: 804 ---DKTSTENIDETGNALTAEDQLTMEKKIKKKKTLLGKVGNLLKKKAPVNQK 853
>ref|NP_186943.1| unknown protein; protein id: At3g02930.1 [Arabidopsis thaliana]
gi|6728968|gb|AAF26966.1|AC018363_11 unknown protein
[Arabidopsis thaliana]
Length = 806
Score = 68.6 bits (166), Expect = 7e-11
Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Frame = -2
Query: 634 ENVNGKLKED----ESREKS---DSVEGEFKMWESCTIEKKEFSPERVPKPVSYEEEEVE 476
+ +N KL+ED E +E+S ++VE EFKMWESC IEKKE + +E +
Sbjct: 701 DGMNMKLEEDTEKKEKKERSPEDETVEVEFKMWESCQIEKKEV----------FHKESAK 750
Query: 475 SKKEDSVGVEQINGGSVTENIDNGGSSPSKQQVKKKKKALLVKFGSLLKKKGGSNHK 305
++ED V+Q S + G K++ KKKKK L K G+LLKKKG N K
Sbjct: 751 EEEEDLNVVDQSQKTSPVNGL-TGEDELLKEKEKKKKKTLFGKVGNLLKKKGPVNQK 806
>ref|NP_680744.1| hypothetical protein; protein id: At4g27595.1 [Arabidopsis thaliana]
Length = 1212
Score = 55.8 bits (133), Expect = 5e-07
Identities = 42/98 (42%), Positives = 56/98 (56%), Gaps = 1/98 (1%)
Frame = -2
Query: 604 ESREKSDSVEGEFKMWESCTIEKKEFSPERVPKPVSYEEEEVESKKEDSVGVEQI-NGGS 428
E + D+VE E +EK+E S ER + + EEEV+SK E S +Q+ NG S
Sbjct: 1122 EKGKDKDTVESEVYH-----LEKREASSERDTEH-DFAEEEVDSKAEGSENFDQLSNGLS 1175
Query: 427 VTENIDNGGSSPSKQQVKKKKKALLVKFGSLLKKKGGS 314
+ E ++ SK Q +KKKK LL KFG+LLKKK S
Sbjct: 1176 LAEQTED---VVSKDQQQKKKKPLLRKFGNLLKKKSSS 1210
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,080,184
Number of Sequences: 1393205
Number of extensions: 11501994
Number of successful extensions: 40142
Number of sequences better than 10.0: 159
Number of HSP's better than 10.0 without gapping: 36119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39487
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26439068301
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
