Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002749A_C01 KMC002749A_c01
(545 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32557.1| putative thioredoxin reductase [Arabidopsis thali... 180 1e-44
ref|NP_565954.1| putative thioredoxin reductase; protein id: At2... 180 1e-44
gb|AAL08250.1| At2g41680/T32G6.20 [Arabidopsis thaliana] gi|2330... 180 1e-44
dbj|BAC15472.1| putative thioredoxin reductase [Oryza sativa (ja... 179 1e-44
pir||T00824 probable thioredoxin reductase At2g41680 [imported] ... 146 2e-34
>gb|AAL32557.1| putative thioredoxin reductase [Arabidopsis thaliana]
gi|20259804|gb|AAM13249.1| putative thioredoxin
reductase [Arabidopsis thaliana]
Length = 231
Score = 180 bits (456), Expect = 1e-44
Identities = 83/97 (85%), Positives = 94/97 (96%)
Frame = -3
Query: 543 ALRKLYHESPRLICVLYTSPTCGPCRTLKPILSKVIDEFDQNVHFVEIDIEEDQEVAAAA 364
ALRKLYHESPR+I VLYTSPTCGPCRTLKPIL+KV+DE++ +VHFVEIDIEEDQE+A AA
Sbjct: 135 ALRKLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAA 194
Query: 363 GIMGTPCVQFFKNKEMLKTVSGVKMKREYREFIESNK 253
GIMGTPCVQFFKNKEML+T+SGVKMK+EYREFIE+NK
Sbjct: 195 GIMGTPCVQFFKNKEMLRTISGVKMKKEYREFIEANK 231
>ref|NP_565954.1| putative thioredoxin reductase; protein id: At2g41680.1, supported
by cDNA: gi_15912232 [Arabidopsis thaliana]
gi|20196949|gb|AAB84351.2| putative thioredoxin
reductase [Arabidopsis thaliana]
Length = 529
Score = 180 bits (456), Expect = 1e-44
Identities = 83/97 (85%), Positives = 94/97 (96%)
Frame = -3
Query: 543 ALRKLYHESPRLICVLYTSPTCGPCRTLKPILSKVIDEFDQNVHFVEIDIEEDQEVAAAA 364
ALRKLYHESPR+I VLYTSPTCGPCRTLKPIL+KV+DE++ +VHFVEIDIEEDQE+A AA
Sbjct: 433 ALRKLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAA 492
Query: 363 GIMGTPCVQFFKNKEMLKTVSGVKMKREYREFIESNK 253
GIMGTPCVQFFKNKEML+T+SGVKMK+EYREFIE+NK
Sbjct: 493 GIMGTPCVQFFKNKEMLRTISGVKMKKEYREFIEANK 529
>gb|AAL08250.1| At2g41680/T32G6.20 [Arabidopsis thaliana]
gi|23308231|gb|AAN18085.1| At2g41680/T32G6.20
[Arabidopsis thaliana]
Length = 529
Score = 180 bits (456), Expect = 1e-44
Identities = 83/97 (85%), Positives = 94/97 (96%)
Frame = -3
Query: 543 ALRKLYHESPRLICVLYTSPTCGPCRTLKPILSKVIDEFDQNVHFVEIDIEEDQEVAAAA 364
ALRKLYHESPR+I VLYTSPTCGPCRTLKPIL+KV+DE++ +VHFVEIDIEEDQE+A AA
Sbjct: 433 ALRKLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAA 492
Query: 363 GIMGTPCVQFFKNKEMLKTVSGVKMKREYREFIESNK 253
GIMGTPCVQFFKNKEML+T+SGVKMK+EYREFIE+NK
Sbjct: 493 GIMGTPCVQFFKNKEMLRTISGVKMKKEYREFIEANK 529
>dbj|BAC15472.1| putative thioredoxin reductase [Oryza sativa (japonica
cultivar-group)] gi|22831283|dbj|BAC16138.1| putative
thioredoxin reductase [Oryza sativa (japonica
cultivar-group)]
Length = 529
Score = 179 bits (455), Expect = 1e-44
Identities = 86/97 (88%), Positives = 94/97 (96%)
Frame = -3
Query: 543 ALRKLYHESPRLICVLYTSPTCGPCRTLKPILSKVIDEFDQNVHFVEIDIEEDQEVAAAA 364
ALRK+YHESPRL+CVLYTSPTCGPCRTLKPILSKVIDE++++VHFVEIDIEED E+A AA
Sbjct: 434 ALRKVYHESPRLVCVLYTSPTCGPCRTLKPILSKVIDEYNEHVHFVEIDIEEDPEIAEAA 493
Query: 363 GIMGTPCVQFFKNKEMLKTVSGVKMKREYREFIESNK 253
GIMGTPCVQFFKNKEML TVSGVKMK+EYREFIESNK
Sbjct: 494 GIMGTPCVQFFKNKEML-TVSGVKMKKEYREFIESNK 529
>pir||T00824 probable thioredoxin reductase At2g41680 [imported] - Arabidopsis
thaliana
Length = 535
Score = 146 bits (368), Expect = 2e-34
Identities = 67/78 (85%), Positives = 75/78 (95%)
Frame = -3
Query: 543 ALRKLYHESPRLICVLYTSPTCGPCRTLKPILSKVIDEFDQNVHFVEIDIEEDQEVAAAA 364
ALRKLYHESPR+I VLYTSPTCGPCRTLKPIL+KV+DE++ +VHFVEIDIEEDQE+A AA
Sbjct: 433 ALRKLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAA 492
Query: 363 GIMGTPCVQFFKNKEMLK 310
GIMGTPCVQFFKNKEML+
Sbjct: 493 GIMGTPCVQFFKNKEMLR 510
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 452,076,386
Number of Sequences: 1393205
Number of extensions: 8968247
Number of successful extensions: 24707
Number of sequences better than 10.0: 802
Number of HSP's better than 10.0 without gapping: 23688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24582
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18660035355
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
