Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002739A_C01 KMC002739A_c01
(566 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198672.1| putative protein; protein id: At5g38560.1, supp... 88 8e-17
ref|NP_177036.1| protein kinase, putative; protein id: At1g68690... 65 6e-10
dbj|BAB39873.1| putative protein kinase [Oryza sativa (japonica ... 64 1e-09
ref|NP_173940.1| Pto kinase interactor, putative; protein id: At... 64 1e-09
ref|NP_172532.1| protein kinase, putative; protein id: At1g10620... 52 5e-06
>ref|NP_198672.1| putative protein; protein id: At5g38560.1, supported by cDNA:
gi_15983496, supported by cDNA: gi_18700152 [Arabidopsis
thaliana] gi|10176824|dbj|BAB10146.1| contains
similarity to protein kinase~gene_id:MBB18.10
[Arabidopsis thaliana]
gi|15983497|gb|AAL11616.1|AF424623_1 AT5g38560/MBB18_10
[Arabidopsis thaliana] gi|18700153|gb|AAL77688.1|
AT5g38560/MBB18_10 [Arabidopsis thaliana]
gi|21360463|gb|AAM47347.1| AT5g38560/MBB18_10
[Arabidopsis thaliana]
Length = 681
Score = 87.8 bits (216), Expect = 8e-17
Identities = 46/65 (70%), Positives = 54/65 (82%), Gaps = 3/65 (4%)
Frame = -3
Query: 564 RALDSLDEFLDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQD-NSTFFNETQ--SSW 394
RALD+L+E D+ NGM+PGQS VFDS QQSAQIRMF+RMAFGSQD +S FF+ +Q SSW
Sbjct: 612 RALDTLEEATDITNGMRPGQSQVFDSRQQSAQIRMFQRMAFGSQDYSSDFFDRSQSHSSW 671
Query: 393 RSRDQ 379
SRDQ
Sbjct: 672 GSRDQ 676
>ref|NP_177036.1| protein kinase, putative; protein id: At1g68690.1, supported by
cDNA: gi_21280864 [Arabidopsis thaliana]
gi|25404764|pir||D96711 hypothetical protein F24J5.8
[imported] - Arabidopsis thaliana
gi|5734709|gb|AAD49974.1|AC008075_7 Contains PF|00069
Eukaryotic protein kinase domain. [Arabidopsis thaliana]
gi|14334806|gb|AAK59581.1| putative protein kinase
[Arabidopsis thaliana] gi|21280865|gb|AAM44925.1|
putative protein kinase [Arabidopsis thaliana]
Length = 708
Score = 65.1 bits (157), Expect = 6e-10
Identities = 38/61 (62%), Positives = 47/61 (76%)
Frame = -3
Query: 564 RALDSLDEFLDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDNSTFFNETQSSWRSR 385
RA +SL DL NGM+ G+S VF+SAQQSA+IR+FRRMAFGSQ+ ST F + SS+ SR
Sbjct: 647 RAFESLAAE-DLTNGMRLGESEVFNSAQQSAEIRLFRRMAFGSQNYSTDF-FSHSSYNSR 704
Query: 384 D 382
D
Sbjct: 705 D 705
>dbj|BAB39873.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 698
Score = 64.3 bits (155), Expect = 1e-09
Identities = 36/63 (57%), Positives = 50/63 (79%)
Frame = -3
Query: 564 RALDSLDEFLDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDNSTFFNETQSSWRSR 385
R LDSL + +DL+NG++PG+S +F+ A +A+IR+F+RMAFGSQD +T F TQSSW SR
Sbjct: 631 RVLDSLAD-VDLSNGIQPGKSEMFNVAN-TAEIRLFQRMAFGSQDFTTDF--TQSSWDSR 686
Query: 384 DQD 376
+D
Sbjct: 687 SRD 689
>ref|NP_173940.1| Pto kinase interactor, putative; protein id: At1g26150.1
[Arabidopsis thaliana] gi|25403034|pir||F86387 probable
Pto kinase interactor [imported] - Arabidopsis thaliana
gi|12321185|gb|AAG50687.1|AC079829_20 Pto kinase
interactor, putative [Arabidopsis thaliana]
Length = 760
Score = 63.9 bits (154), Expect = 1e-09
Identities = 36/63 (57%), Positives = 50/63 (79%)
Frame = -3
Query: 564 RALDSLDEFLDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDNSTFFNETQSSWRSR 385
RA DSL E DL NGM+ G+S + +SAQQSA+IR+FRRMAFGSQ+ ST + T++S+ S+
Sbjct: 699 RAFDSLAEE-DLTNGMRLGESEIINSAQQSAEIRLFRRMAFGSQNYST-DSLTRNSYISK 756
Query: 384 DQD 376
D++
Sbjct: 757 DEN 759
>ref|NP_172532.1| protein kinase, putative; protein id: At1g10620.1 [Arabidopsis
thaliana]
Length = 718
Score = 52.0 bits (123), Expect = 5e-06
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = -3
Query: 564 RALDSLDEFLDLNNGMKPGQSSVFDSAQQSAQIRMFRRMAFGSQDNST 421
RALD+ D+ DL NG+K GQS V+DS Q S +IR+FRR + S D T
Sbjct: 641 RALDTRDDLSDLTNGVKVGQSRVYDSGQYSNEIRIFRRASEDSSDLGT 688
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,751,389
Number of Sequences: 1393205
Number of extensions: 9295616
Number of successful extensions: 23296
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 22731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23278
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
