Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002738A_C01 KMC002738A_c01
(543 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC22345.1| similar to acid phosphatase [Oryza sativa (japon... 177 7e-44
pir||B96718 probable sterol desaturase T6C23.16 [imported] - Ara... 163 1e-39
ref|NP_177122.2| acid phosphatase, putative; protein id: At1g696... 163 1e-39
pir||A86277 F14L17.5 protein - Arabidopsis thaliana gi|7262670|g... 158 5e-38
ref|NP_563944.1| acid phosphatase, putative; protein id: At1g142... 158 5e-38
>dbj|BAC22345.1| similar to acid phosphatase [Oryza sativa (japonica
cultivar-group)]
Length = 246
Score = 177 bits (449), Expect = 7e-44
Identities = 78/96 (81%), Positives = 86/96 (89%)
Frame = -1
Query: 543 SFLVSGMTARTAVVFFCFAVVKTVDDHCGLWLPGNIFHLFFQNNTAYHDIHHQLQGLKYN 364
SFLVSGMT RT+V FFCFAV+KTVDDHCGLWLP NIF FQNNTAYHD+HHQLQG KYN
Sbjct: 151 SFLVSGMTPRTSVFFFCFAVLKTVDDHCGLWLPYNIFQSLFQNNTAYHDVHHQLQGSKYN 210
Query: 363 YSQPFFPIWDKLLGTHMPFNLVKRPEGGFEARPAKD 256
YSQPFF IWD++LGTHMP+NLV+R EGGFEARP +D
Sbjct: 211 YSQPFFSIWDRILGTHMPYNLVRRKEGGFEARPLRD 246
>pir||B96718 probable sterol desaturase T6C23.16 [imported] - Arabidopsis
thaliana gi|10092291|gb|AAG12703.1|AC021046_4 acid
phosphatase, putative; 5376-6903 [Arabidopsis thaliana]
gi|12325199|gb|AAG52550.1|AC013289_17 putative sterol
desaturase; 75442-76969 [Arabidopsis thaliana]
Length = 258
Score = 163 bits (413), Expect = 1e-39
Identities = 68/96 (70%), Positives = 85/96 (87%)
Frame = -1
Query: 543 SFLVSGMTARTAVVFFCFAVVKTVDDHCGLWLPGNIFHLFFQNNTAYHDIHHQLQGLKYN 364
SFLVSGM+ RT++ FF FA +KTVDDHCGLWLPGN+FH+ F+NN+AYHDIHHQL G KYN
Sbjct: 159 SFLVSGMSPRTSIFFFSFATIKTVDDHCGLWLPGNLFHMVFKNNSAYHDIHHQLYGTKYN 218
Query: 363 YSQPFFPIWDKLLGTHMPFNLVKRPEGGFEARPAKD 256
+SQPFF +WD++LGT+MP++L KR +GGFEARP K+
Sbjct: 219 FSQPFFVMWDRILGTYMPYSLEKREDGGFEARPTKE 254
>ref|NP_177122.2| acid phosphatase, putative; protein id: At1g69640.1, supported by
cDNA: gi_17979534 [Arabidopsis thaliana]
gi|17979535|gb|AAL50102.1| At1g69640/F24J1.22
[Arabidopsis thaliana] gi|23505995|gb|AAN28857.1|
At1g69640/F24J1.22 [Arabidopsis thaliana]
Length = 260
Score = 163 bits (413), Expect = 1e-39
Identities = 68/96 (70%), Positives = 85/96 (87%)
Frame = -1
Query: 543 SFLVSGMTARTAVVFFCFAVVKTVDDHCGLWLPGNIFHLFFQNNTAYHDIHHQLQGLKYN 364
SFLVSGM+ RT++ FF FA +KTVDDHCGLWLPGN+FH+ F+NN+AYHDIHHQL G KYN
Sbjct: 161 SFLVSGMSPRTSIFFFSFATIKTVDDHCGLWLPGNLFHMVFKNNSAYHDIHHQLYGTKYN 220
Query: 363 YSQPFFPIWDKLLGTHMPFNLVKRPEGGFEARPAKD 256
+SQPFF +WD++LGT+MP++L KR +GGFEARP K+
Sbjct: 221 FSQPFFVMWDRILGTYMPYSLEKREDGGFEARPTKE 256
>pir||A86277 F14L17.5 protein - Arabidopsis thaliana
gi|7262670|gb|AAF43928.1|AC012188_5 Contains similarity
to acid phosphatase from Lupinus albus gb|AB023385 and
contains a Sterol desaturase PF|01598 domain. EST
gb|AI995340 comes from this gene. [Arabidopsis thaliana]
Length = 258
Score = 158 bits (399), Expect = 5e-38
Identities = 66/95 (69%), Positives = 80/95 (83%)
Frame = -1
Query: 543 SFLVSGMTARTAVVFFCFAVVKTVDDHCGLWLPGNIFHLFFQNNTAYHDIHHQLQGLKYN 364
SFL SGM+ RTA+ FF FA +KTVDDHCGLWLPGN FH+FF NN+AYHD+HHQL G KYN
Sbjct: 159 SFLFSGMSPRTAIFFFSFATIKTVDDHCGLWLPGNPFHIFFSNNSAYHDVHHQLYGTKYN 218
Query: 363 YSQPFFPIWDKLLGTHMPFNLVKRPEGGFEARPAK 259
+SQPFF +WD++LGT++P++L KR GGFE RP K
Sbjct: 219 FSQPFFVMWDRILGTYLPYSLEKRANGGFETRPIK 253
>ref|NP_563944.1| acid phosphatase, putative; protein id: At1g14290.1, supported by
cDNA: gi_13605749 [Arabidopsis thaliana]
gi|13605750|gb|AAK32868.1|AF361856_1 At1g14290/F14L17_4
[Arabidopsis thaliana] gi|24797014|gb|AAN64519.1|
At1g14290/F14L17_4 [Arabidopsis thaliana]
Length = 259
Score = 158 bits (399), Expect = 5e-38
Identities = 66/95 (69%), Positives = 80/95 (83%)
Frame = -1
Query: 543 SFLVSGMTARTAVVFFCFAVVKTVDDHCGLWLPGNIFHLFFQNNTAYHDIHHQLQGLKYN 364
SFL SGM+ RTA+ FF FA +KTVDDHCGLWLPGN FH+FF NN+AYHD+HHQL G KYN
Sbjct: 160 SFLFSGMSPRTAIFFFSFATIKTVDDHCGLWLPGNPFHIFFSNNSAYHDVHHQLYGTKYN 219
Query: 363 YSQPFFPIWDKLLGTHMPFNLVKRPEGGFEARPAK 259
+SQPFF +WD++LGT++P++L KR GGFE RP K
Sbjct: 220 FSQPFFVMWDRILGTYLPYSLEKRANGGFETRPIK 254
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,309,151
Number of Sequences: 1393205
Number of extensions: 10298100
Number of successful extensions: 23059
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 22308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23031
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
