Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002736A_C01 KMC002736A_c01
(697 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB52708.1| glucose-6-phosphate 1-dehydrogenase [Solanum tub... 173 2e-53
sp|Q43793|G6PC_TOBAC Glucose-6-phosphate 1-dehydrogenase, chloro... 174 4e-53
dbj|BAC23041.1| glucose 6-phosphate dehydrogenase [Solanum tuber... 171 1e-52
ref|NP_196815.2| glucose-6-phosphate 1-dehydrogenase; protein id... 175 2e-52
emb|CAC05439.1| glucose-6-phosphate 1-dehydrogenase [Arabidopsis... 175 2e-52
>emb|CAB52708.1| glucose-6-phosphate 1-dehydrogenase [Solanum tuberosum]
Length = 582
Score = 173 bits (439), Expect(2) = 2e-53
Identities = 86/97 (88%), Positives = 93/97 (95%)
Frame = -3
Query: 695 LDRATNELVIRVQPDEAIYLKINHKVPGLEMRLDRSHLNLHYAARYAKEIPDAYERLLLD 516
LD+ATNELVIRVQPDEAIYLKIN+KVPGL MRLDRS+LNL Y+ARYAKEIPDAYERLLLD
Sbjct: 459 LDQATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLLYSARYAKEIPDAYERLLLD 518
Query: 515 AIEGERRLFIRSDELDAAWSLFTPLLNELEEKKVIPE 405
AIEGERRLFIRSDELDAAWSLFTP+L ELE KK++PE
Sbjct: 519 AIEGERRLFIRSDELDAAWSLFTPVLKELEHKKIVPE 555
Score = 58.2 bits (139), Expect(2) = 2e-53
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -1
Query: 427 KRKK*FQSTYPYGSRGPVGAHYLAARYNVRWGD 329
+ KK +YPYGSRGP+GAHYLAARY VRWGD
Sbjct: 548 EHKKIVPESYPYGSRGPIGAHYLAARYKVRWGD 580
>sp|Q43793|G6PC_TOBAC Glucose-6-phosphate 1-dehydrogenase, chloroplast precursor (G6PD)
gi|7431273|pir||T03244 glucose-6-phosphate
1-dehydrogenase (EC 1.1.1.49) - common tobacco
gi|1480344|emb|CAA67782.1| glucose-6-phosphate
dehydrogenase [Nicotiana tabacum]
Length = 593
Score = 174 bits (440), Expect(2) = 4e-53
Identities = 85/98 (86%), Positives = 95/98 (96%)
Frame = -3
Query: 695 LDRATNELVIRVQPDEAIYLKINHKVPGLEMRLDRSHLNLHYAARYAKEIPDAYERLLLD 516
LD+ATNELVIRVQP+EAIYLKIN+KVPGL MRLDRS+LNL Y+ARY+KEIPDAYERLLLD
Sbjct: 470 LDQATNELVIRVQPNEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLD 529
Query: 515 AIEGERRLFIRSDELDAAWSLFTPLLNELEEKKVIPEY 402
AIEGERRLFIRSDELDAAWSLFTP+L ELE+KK++PEY
Sbjct: 530 AIEGERRLFIRSDELDAAWSLFTPVLKELEDKKIVPEY 567
Score = 56.6 bits (135), Expect(2) = 4e-53
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -1
Query: 421 KK*FQSTYPYGSRGPVGAHYLAARYNVRWGD 329
KK YPYGSRGP+GAHYLAARY VRWGD
Sbjct: 561 KKIVPEYYPYGSRGPIGAHYLAARYKVRWGD 591
>dbj|BAC23041.1| glucose 6-phosphate dehydrogenase [Solanum tuberosum]
Length = 581
Score = 171 bits (433), Expect(2) = 1e-52
Identities = 84/97 (86%), Positives = 93/97 (95%)
Frame = -3
Query: 695 LDRATNELVIRVQPDEAIYLKINHKVPGLEMRLDRSHLNLHYAARYAKEIPDAYERLLLD 516
LD+ATNELVIRVQPDEAIYLKIN+KVPGL MRLDRS+LNL Y+ARY+KEIPDAYERLLLD
Sbjct: 458 LDQATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLD 517
Query: 515 AIEGERRLFIRSDELDAAWSLFTPLLNELEEKKVIPE 405
AIEGERRLFIRSDELDAAWSLFTP+L +LE KK++PE
Sbjct: 518 AIEGERRLFIRSDELDAAWSLFTPVLKDLEHKKIVPE 554
Score = 58.2 bits (139), Expect(2) = 1e-52
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = -1
Query: 427 KRKK*FQSTYPYGSRGPVGAHYLAARYNVRWGD 329
+ KK +YPYGSRGP+GAHYLAARY VRWGD
Sbjct: 547 EHKKIVPESYPYGSRGPIGAHYLAARYKVRWGD 579
>ref|NP_196815.2| glucose-6-phosphate 1-dehydrogenase; protein id: At5g13110.1,
supported by cDNA: gi_18086447 [Arabidopsis thaliana]
gi|25452980|sp|Q9FY99|GPD2_ARATH Glucose-6-phosphate
1-dehydrogenase 2, chloroplast precursor (G6PD2)
(G6PDH2)
Length = 596
Score = 175 bits (444), Expect(2) = 2e-52
Identities = 88/98 (89%), Positives = 94/98 (95%)
Frame = -3
Query: 695 LDRATNELVIRVQPDEAIYLKINHKVPGLEMRLDRSHLNLHYAARYAKEIPDAYERLLLD 516
LD+ATNELVIRVQPDEAIYLKIN+KVPGL MRLDRS+LNL Y+ARY+KEIPDAYERLLLD
Sbjct: 470 LDQATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLD 529
Query: 515 AIEGERRLFIRSDELDAAWSLFTPLLNELEEKKVIPEY 402
AIEGERRLFIRSDELDAAWSLFTPLL E+EEKK IPEY
Sbjct: 530 AIEGERRLFIRSDELDAAWSLFTPLLKEIEEKKRIPEY 567
Score = 53.1 bits (126), Expect(2) = 2e-52
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -1
Query: 427 KRKK*FQSTYPYGSRGPVGAHYLAARYNVRWGD 329
+ KK YPYGSRGPVGAHYLAA++ V+WGD
Sbjct: 559 EEKKRIPEYYPYGSRGPVGAHYLAAKHKVQWGD 591
>emb|CAC05439.1| glucose-6-phosphate 1-dehydrogenase [Arabidopsis thaliana]
Length = 593
Score = 175 bits (444), Expect(2) = 2e-52
Identities = 88/98 (89%), Positives = 94/98 (95%)
Frame = -3
Query: 695 LDRATNELVIRVQPDEAIYLKINHKVPGLEMRLDRSHLNLHYAARYAKEIPDAYERLLLD 516
LD+ATNELVIRVQPDEAIYLKIN+KVPGL MRLDRS+LNL Y+ARY+KEIPDAYERLLLD
Sbjct: 467 LDQATNELVIRVQPDEAIYLKINNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLD 526
Query: 515 AIEGERRLFIRSDELDAAWSLFTPLLNELEEKKVIPEY 402
AIEGERRLFIRSDELDAAWSLFTPLL E+EEKK IPEY
Sbjct: 527 AIEGERRLFIRSDELDAAWSLFTPLLKEIEEKKRIPEY 564
Score = 53.1 bits (126), Expect(2) = 2e-52
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = -1
Query: 427 KRKK*FQSTYPYGSRGPVGAHYLAARYNVRWGD 329
+ KK YPYGSRGPVGAHYLAA++ V+WGD
Sbjct: 556 EEKKRIPEYYPYGSRGPVGAHYLAAKHKVQWGD 588
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,592,386
Number of Sequences: 1393205
Number of extensions: 11066957
Number of successful extensions: 27879
Number of sequences better than 10.0: 278
Number of HSP's better than 10.0 without gapping: 26633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27706
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31684559424
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
