Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002735A_C01 KMC002735A_c01
(590 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195341.1| leucine-rich repeat transmembrane protein kinas... 261 4e-69
gb|AAL86290.1| putative receptor protein kinase [Arabidopsis tha... 261 4e-69
ref|NP_177694.1| leucine-rich repeat transmembrane protein kinas... 247 7e-65
ref|NP_194578.1| leucine-rich repeat transmembrane protein kinas... 99 5e-20
dbj|BAC65046.1| P0458H05.18 [Oryza sativa (japonica cultivar-gro... 96 3e-19
>ref|NP_195341.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g36180.1 [Arabidopsis thaliana]
gi|7434426|pir||T04587 hypothetical protein F23E13.70 -
Arabidopsis thaliana gi|2961377|emb|CAA18124.1| putative
receptor protein kinase [Arabidopsis thaliana]
gi|7270570|emb|CAB81527.1| putative receptor protein
kinase [Arabidopsis thaliana]
Length = 1134
Score = 261 bits (668), Expect = 4e-69
Identities = 125/159 (78%), Positives = 145/159 (90%)
Frame = -1
Query: 590 AHLSDFGLDQLTIAAATSTEAASTSTSAGTVGYISPEAILTGEASKESDVYSFGIVLLEL 411
AH+SDFGLD+LTI + + +A T+ + GT+GY+SPEA L+GE ++ESD+YSFGIVLLE+
Sbjct: 978 AHISDFGLDRLTIRSPS--RSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEI 1035
Query: 410 LTGKRPVMFTQDEDIVKWVKKQLPKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCT 231
LTGKRPVMFTQDEDIVKWVKKQL +GQ+TELLEPGLLELDPESSEWEEFLLG+KVGLLCT
Sbjct: 1036 LTGKRPVMFTQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCT 1095
Query: 230 APDPLDRPTMADIVFMLEGCRVGPDIPSSADPTSPTSPA 114
A DPLDRPTM+D+VFMLEGCRVGPD+PSSADPTS SPA
Sbjct: 1096 ATDPLDRPTMSDVVFMLEGCRVGPDVPSSADPTSQPSPA 1134
>gb|AAL86290.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 407
Score = 261 bits (668), Expect = 4e-69
Identities = 125/159 (78%), Positives = 145/159 (90%)
Frame = -1
Query: 590 AHLSDFGLDQLTIAAATSTEAASTSTSAGTVGYISPEAILTGEASKESDVYSFGIVLLEL 411
AH+SDFGLD+LTI + + +A T+ + GT+GY+SPEA L+GE ++ESD+YSFGIVLLE+
Sbjct: 251 AHISDFGLDRLTIRSPS--RSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEI 308
Query: 410 LTGKRPVMFTQDEDIVKWVKKQLPKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCT 231
LTGKRPVMFTQDEDIVKWVKKQL +GQ+TELLEPGLLELDPESSEWEEFLLG+KVGLLCT
Sbjct: 309 LTGKRPVMFTQDEDIVKWVKKQLQRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCT 368
Query: 230 APDPLDRPTMADIVFMLEGCRVGPDIPSSADPTSPTSPA 114
A DPLDRPTM+D+VFMLEGCRVGPD+PSSADPTS SPA
Sbjct: 369 ATDPLDRPTMSDVVFMLEGCRVGPDVPSSADPTSQPSPA 407
>ref|NP_177694.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At1g75640.1 [Arabidopsis thaliana]
gi|9369365|gb|AAF87114.1|AC006434_10 F10A5.16
[Arabidopsis thaliana]
Length = 1140
Score = 247 bits (631), Expect = 7e-65
Identities = 123/159 (77%), Positives = 140/159 (87%)
Frame = -1
Query: 590 AHLSDFGLDQLTIAAATSTEAASTSTSAGTVGYISPEAILTGEASKESDVYSFGIVLLEL 411
AHLS+FGLD+LT A + E +++ST G++GYI+PEA LTGE SKESDVYSFGIVLLE+
Sbjct: 978 AHLSEFGLDRLT-ALTPAEEPSTSSTPVGSLGYIAPEAGLTGETSKESDVYSFGIVLLEI 1036
Query: 410 LTGKRPVMFTQDEDIVKWVKKQLPKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCT 231
LTGK+ VMFT+DEDIVKWVK+QL KGQI ELLEPGLLELDPESSEWEEFLLG+KVGLLCT
Sbjct: 1037 LTGKKAVMFTEDEDIVKWVKRQLQKGQIVELLEPGLLELDPESSEWEEFLLGIKVGLLCT 1096
Query: 230 APDPLDRPTMADIVFMLEGCRVGPDIPSSADPTSPTSPA 114
D +DRP+MAD+VFMLEGCRVGP I SADPTSPTSPA
Sbjct: 1097 GGDVVDRPSMADVVFMLEGCRVGPAISLSADPTSPTSPA 1135
>ref|NP_194578.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g28490.1, supported by cDNA: gi_166849
[Arabidopsis thaliana] gi|1350783|sp|P47735|RLK5_ARATH
Receptor-like protein kinase 5 precursor
gi|282883|pir||S27756 receptor-like protein kinase 5 (EC
2.7.1.-) precursor - Arabidopsis thaliana
gi|166850|gb|AAA32859.1| receptor-like protein kinase
gi|2842492|emb|CAA16889.1| receptor-like protein kinase 5
precursor (RLK5) [Arabidopsis thaliana]
gi|7269703|emb|CAB79651.1| receptor-like protein kinase 5
precursor (RLK5) [Arabidopsis thaliana]
Length = 999
Score = 98.6 bits (244), Expect = 5e-20
Identities = 60/158 (37%), Positives = 94/158 (58%), Gaps = 1/158 (0%)
Frame = -1
Query: 590 AHLSDFGLDQLTIAAATSTEAASTSTSAGTVGYISPEAILTGEASKESDVYSFGIVLLEL 411
A ++DFG+ ++ + + T A + AG+ GYI+PE + T +++SD+YSFG+VLLEL
Sbjct: 833 AKVADFGIAKVGQMSGSKTPEAMSGI-AGSCGYIAPEYVYTLRVNEKSDIYSFGVVLLEL 891
Query: 410 LTGKRPV-MFTQDEDIVKWVKKQLPKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLC 234
+TGK+P D+D+ KWV L K + +++P L + EE + +GLLC
Sbjct: 892 VTGKQPTDSELGDKDMAKWVCTALDKCGLEPVIDPKL-----DLKFKEEISKVIHIGLLC 946
Query: 233 TAPDPLDRPTMADIVFMLEGCRVGPDIPSSADPTSPTS 120
T+P PL+RP+M +V ML+ V +P S+ TS S
Sbjct: 947 TSPLPLNRPSMRKVVIMLQ--EVSGAVPCSSPNTSKRS 982
>dbj|BAC65046.1| P0458H05.18 [Oryza sativa (japonica cultivar-group)]
Length = 652
Score = 96.3 bits (238), Expect = 3e-19
Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 3/165 (1%)
Frame = -1
Query: 584 LSDFGLDQLTIAAATSTEAASTSTSAGTVGYISPEAILTGEASKESDVYSFGIVLLELLT 405
+ DFGL +L T T+ GT GY+SPE ++ G+ S +SDV+SFG++++E++T
Sbjct: 388 IGDFGLARLFGQDQTRDV---TNRIVGTFGYMSPEYVMRGQYSTKSDVFSFGVLIIEIVT 444
Query: 404 GK---RPVMFTQDEDIVKWVKKQLPKGQITELLEPGLLELDPESSEWEEFLLGVKVGLLC 234
G+ RP +F Q+EDI+ V ++ G + ++++ L + PE+ E L + +GLLC
Sbjct: 445 GQRNNRPYLFEQNEDIISTVWRRWSDGTVAKMIDHSLGKNYPEA----EVLKCINIGLLC 500
Query: 233 TAPDPLDRPTMADIVFMLEGCRVGPDIPSSADPTSPTSPA*PEFA 99
+P++RPTMADI+ +L S+A + P A P F+
Sbjct: 501 LQENPVNRPTMADIMVLLN---------SNASSSIPAPAARPTFS 536
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.312 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 565,498,259
Number of Sequences: 1393205
Number of extensions: 13790952
Number of successful extensions: 77811
Number of sequences better than 10.0: 5880
Number of HSP's better than 10.0 without gapping: 52195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72173
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
