Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002732A_C01 KMC002732A_c01
(701 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176298.1| unknown protein; protein id: At1g61030.1 [Arabi... 143 2e-33
gb|AAL58277.1|AC068923_19 putative dentin phosphoryn protein [Or... 121 8e-27
ref|NP_172573.1| unknown protein; protein id: At1g11060.1 [Arabi... 80 2e-14
gb|AAO14651.1|AF479418_1 FOE [Homo sapiens] 42 0.008
ref|XP_208479.1| similar to EG:87B1.2 [Drosophila melanogaster] ... 42 0.008
>ref|NP_176298.1| unknown protein; protein id: At1g61030.1 [Arabidopsis thaliana]
gi|25372804|pir||H96635 unknown protein, 73054-77165
[imported] - Arabidopsis thaliana
gi|12323332|gb|AAG51640.1|AC018908_6 unknown protein;
73054-77165 [Arabidopsis thaliana]
Length = 840
Score = 143 bits (361), Expect = 2e-33
Identities = 74/108 (68%), Positives = 85/108 (78%)
Frame = -1
Query: 701 CSIFLANQGEHEGAGEDKQFVLNDEAAVLQGEKEAEKMIVEAYSALLLAFLSTESKSIRA 522
CSIFL N+G + E F L+DE AVL+ EKEAEKMIVEAYSALLLAFLSTES+SIR
Sbjct: 732 CSIFLTNKGSADTKDETSTFTLDDEEAVLESEKEAEKMIVEAYSALLLAFLSTESRSIRN 791
Query: 521 AISENLPGHNLASLVPVLDRFVEFHLSLDMISPETHKAVSEVIESCRI 378
AI + LP ++A LVPVLDRFV FH +LDMI PETHK V EVIESC++
Sbjct: 792 AIRDYLPKRDMAILVPVLDRFVAFHTTLDMIPPETHKVVMEVIESCKL 839
>gb|AAL58277.1|AC068923_19 putative dentin phosphoryn protein [Oryza sativa (japonica
cultivar-group)]
Length = 888
Score = 121 bits (304), Expect = 8e-27
Identities = 62/108 (57%), Positives = 81/108 (74%)
Frame = -1
Query: 701 CSIFLANQGEHEGAGEDKQFVLNDEAAVLQGEKEAEKMIVEAYSALLLAFLSTESKSIRA 522
CS+FLA+QG E +G +DE +++QG +EAE MIVEAY+ALLLAFLSTES +R
Sbjct: 783 CSVFLASQGASEASGTISP---DDEESLMQGAREAEMMIVEAYAALLLAFLSTESMKVRG 839
Query: 521 AISENLPGHNLASLVPVLDRFVEFHLSLDMISPETHKAVSEVIESCRI 378
AIS LP ++L LVP L++FV FHL L+MI+ ETH AV+EVIE C++
Sbjct: 840 AISSCLPNNSLKILVPALEKFVSFHLQLNMITEETHSAVTEVIEKCKL 887
>ref|NP_172573.1| unknown protein; protein id: At1g11060.1 [Arabidopsis thaliana]
gi|25372802|pir||E86244 unknown protein, 43418-38554
[imported] - Arabidopsis thaliana
gi|1931641|gb|AAB65476.1| unknown protein; 43418-38554
[Arabidopsis thaliana]
Length = 884
Score = 80.5 bits (197), Expect = 2e-14
Identities = 42/56 (75%), Positives = 45/56 (80%)
Frame = -1
Query: 701 CSIFLANQGEHEGAGEDKQFVLNDEAAVLQGEKEAEKMIVEAYSALLLAFLSTESK 534
CSIFL NQG E E F L+DE AVL+GEKEAEKMIVEAYSALLLAFLSTES+
Sbjct: 822 CSIFLTNQGSAETKEETTTFTLDDEEAVLEGEKEAEKMIVEAYSALLLAFLSTESR 877
>gb|AAO14651.1|AF479418_1 FOE [Homo sapiens]
Length = 1227
Score = 42.0 bits (97), Expect = 0.008
Identities = 29/95 (30%), Positives = 46/95 (47%)
Frame = -1
Query: 674 EHEGAGEDKQFVLNDEAAVLQGEKEAEKMIVEAYSALLLAFLSTESKSIRAAISENLPGH 495
+H+ ED++ LN A+ K E IV +Y+ALLL L ES + E LP
Sbjct: 1130 KHKKEEEDEELDLNK--ALQHAGKHMEDCIVASYTALLLGCLCQESPINVTTVREYLPEG 1187
Query: 494 NLASLVPVLDRFVEFHLSLDMISPETHKAVSEVIE 390
+ + + +L +F+ F + K++S VIE
Sbjct: 1188 DFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIE 1222
>ref|XP_208479.1| similar to EG:87B1.2 [Drosophila melanogaster] [Homo sapiens]
Length = 1275
Score = 42.0 bits (97), Expect = 0.008
Identities = 29/95 (30%), Positives = 46/95 (47%)
Frame = -1
Query: 674 EHEGAGEDKQFVLNDEAAVLQGEKEAEKMIVEAYSALLLAFLSTESKSIRAAISENLPGH 495
+H+ ED++ LN A+ K E IV +Y+ALLL L ES + E LP
Sbjct: 1178 KHKKEEEDEELDLNK--ALQHAGKHMEDCIVASYTALLLGCLCQESPINVTTVREYLPEG 1235
Query: 494 NLASLVPVLDRFVEFHLSLDMISPETHKAVSEVIE 390
+ + + +L +F+ F + K++S VIE
Sbjct: 1236 DFSIMTEMLKKFLSFMNLTCAVGTTGQKSISRVIE 1270
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 579,215,266
Number of Sequences: 1393205
Number of extensions: 12279206
Number of successful extensions: 38959
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 34991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38505
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 32250355128
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
