Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002711A_C01 KMC002711A_c01
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC41801.1| putative receptor protein kinase [Arabidopsis th... 89 6e-17
ref|NP_199787.1| receptor protein kinase-like; protein id: At5g4... 87 2e-16
ref|NP_199789.1| leucine-rich repeat transmembrane protein kinas... 80 3e-14
ref|NP_199788.1| leucine-rich repeat transmembrane protein kinas... 74 2e-12
dbj|BAB64823.1| putative receptor protein kinase [Oryza sativa (... 69 4e-11
>dbj|BAC41801.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 953
Score = 88.6 bits (218), Expect = 6e-17
Identities = 47/100 (47%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Frame = -3
Query: 625 GKYILKVLKNAIDKTKDFCVLKEMLDPTIDLATP-LPGFEKFVDLAIPSVEDSSSNRPSM 449
GKY+++ +K ++K++ L+E+LD TI ++ L GFEK+VDLA+ VE+ NRPSM
Sbjct: 835 GKYVVREVKTKMNKSRSLYDLQELLDTTIIASSGNLKGFEKYVDLALRCVEEEGVNRPSM 894
Query: 448 NYVVKEIENMLHLAGAYPNPESASTSSSYEVSKGSSLHPY 329
VVKEIEN++ LAG PN +SA++S +YE + S PY
Sbjct: 895 GEVVKEIENIMQLAGLNPNSDSATSSRTYEDAIKGSGDPY 934
>ref|NP_199787.1| receptor protein kinase-like; protein id: At5g49760.1 [Arabidopsis
thaliana] gi|8978273|dbj|BAA98164.1| receptor protein
kinase-like [Arabidopsis thaliana]
Length = 941
Score = 86.7 bits (213), Expect = 2e-16
Identities = 47/96 (48%), Positives = 68/96 (69%), Gaps = 2/96 (2%)
Frame = -3
Query: 625 GKYILKVLKNAIDKTKDFCVLKEMLDPTIDLATP-LPGFEKFVDLAIPSVEDSSSNRPSM 449
GKY+++ +K ++K++ L+E+LD TI ++ L GFEK+VDLA+ VE+ NRPSM
Sbjct: 810 GKYVVREVKTKMNKSRSLYDLQELLDTTIIASSGNLKGFEKYVDLALRCVEEEGVNRPSM 869
Query: 448 NYVVKEIENMLHLAGAYPNPESASTSSSYE-VSKGS 344
VVKEIEN++ LAG PN +SA++S +YE KGS
Sbjct: 870 GEVVKEIENIMQLAGLNPNSDSATSSRTYEDAIKGS 905
>ref|NP_199789.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g49780.1 [Arabidopsis thaliana]
gi|8978275|dbj|BAA98166.1| receptor protein kinase-like
[Arabidopsis thaliana]
Length = 1006
Score = 79.7 bits (195), Expect = 3e-14
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Frame = -3
Query: 625 GKYILKVLKNAIDKTKDFCVLKEMLDPTIDLATP--LPGFEKFVDLAIPSVEDSSSNRPS 452
GKY++K +K ++K+K+ L++ LD TI + L GFEK+VD+A+ V+ RPS
Sbjct: 887 GKYVVKEMKMKMNKSKNLYDLQDFLDTTISATSNRNLKGFEKYVDVALRCVDPEGVKRPS 946
Query: 451 MNYVVKEIENMLHLAGAYPNPESASTSSSY-EVSKGS 344
MN VVKEIEN++ AG PN ES ++S +Y E SK S
Sbjct: 947 MNEVVKEIENIMQYAGLNPNVESYASSRTYDEASKES 983
>ref|NP_199788.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At5g49770.1 [Arabidopsis thaliana]
gi|8978274|dbj|BAA98165.1| receptor protein kinase-like
[Arabidopsis thaliana]
Length = 946
Score = 73.6 bits (179), Expect = 2e-12
Identities = 40/94 (42%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = -3
Query: 625 GKYILKVLKNAIDKTKDFCVLKEMLDPTI-DLATPLPGFEKFVDLAIPSVEDSSSNRPSM 449
G Y++K +K +DK+++ L+E+LD TI + L GFEK+VD+A+ VE NRP+M
Sbjct: 838 GSYVVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTM 897
Query: 448 NYVVKEIENMLHLAGAYPNPESASTSSSYEVSKG 347
+ VV+E+E++L L G PN +SA +YE + G
Sbjct: 898 SEVVQELESILRLVGLNPNADSA----TYEEASG 927
>dbj|BAB64823.1| putative receptor protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 856
Score = 69.3 bits (168), Expect = 4e-11
Identities = 36/100 (36%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Frame = -3
Query: 625 GKYILKVLKNAIDK-TKDFCVLKEMLDPTIDLATPLPGFEKFVDLAIPSVEDSSSNRPSM 449
G YI++ ++ AID+ +++ LK ++DPTI + + GF +FV LA+ VE+S+++RP+M
Sbjct: 728 GTYIVREIRTAIDQYDQEYYGLKSLIDPTIRDSAKMVGFRRFVQLAMECVEESAADRPTM 787
Query: 448 NYVVKEIENMLHLAGAYPNPESASTSSSYEVSKGSSLHPY 329
N VVKE+E ++ GA ++ ++ + +KG PY
Sbjct: 788 NDVVKELEIIIQNEGAQLLNSASLSAQQFGYAKGRDPDPY 827
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 520,972,060
Number of Sequences: 1393205
Number of extensions: 10795384
Number of successful extensions: 30532
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 29380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30514
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
