Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002667A_C01 KMC002667A_c01
(468 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177586.1| putative lipase/acylhydrolase; protein id: At1g... 45 4e-04
gb|AAO24551.1| At1g74460 [Arabidopsis thaliana] 45 4e-04
gb|AAK54061.1|AF340230_1 ets variant gene 6 protein [Takifugu ru... 33 1.1
dbj|BAC21622.1| hypothetical protein [Macaca fascicularis] 32 2.5
ref|NP_001978.1| ets variant gene 6; TEL1 oncogene [Homo sapiens... 32 2.5
>ref|NP_177586.1| putative lipase/acylhydrolase; protein id: At1g74460.1, supported
by cDNA: 30001. [Arabidopsis thaliana]
gi|25336265|pir||E96773 probable lipase/acylhydrolase
F1M20.14 [imported] - Arabidopsis thaliana
gi|12324806|gb|AAG52368.1|AC011765_20 putative
lipase/acylhydrolase; 46085-44470 [Arabidopsis thaliana]
gi|21592578|gb|AAM64527.1| putative lipase/acylhydrolase
[Arabidopsis thaliana]
Length = 366
Score = 45.1 bits (105), Expect = 4e-04
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Frame = -2
Query: 467 PSDSANELIANELIKKFGF--SHDDPSGAPSPAPAVAPAPED 348
P+D ANEL+AN LIK+F F + D S APSPAP ++P+ ++
Sbjct: 324 PTDKANELVANILIKRFDFMRADDGISHAPSPAPDISPSSDN 365
>gb|AAO24551.1| At1g74460 [Arabidopsis thaliana]
Length = 275
Score = 45.1 bits (105), Expect = 4e-04
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Frame = -2
Query: 467 PSDSANELIANELIKKFGF--SHDDPSGAPSPAPAVAPAPED 348
P+D ANEL+AN LIK+F F + D S APSPAP ++P+ ++
Sbjct: 233 PTDKANELVANILIKRFDFMRADDGISHAPSPAPDISPSSDN 274
>gb|AAK54061.1|AF340230_1 ets variant gene 6 protein [Takifugu rubripes]
Length = 465
Score = 33.5 bits (75), Expect = 1.1
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Frame = +3
Query: 93 DQDISVTQFEENTLLTDELHTYIYVMHKERKYQKYLSYDS--KKLFR----TGY*KC-SN 251
+Q I + + + LL D Y+Y + + +Y+ Y+ ++ K+FR G + N
Sbjct: 341 EQQIPIGRIADCRLLWD----YVYQLLSDSRYENYIRWEDAESKVFRIMDPNGLARLWGN 396
Query: 252 HKRKLCIT-EKYLLPLPHIMSTSSIRKENIESLIFR 356
HK + +T EK L H + IRKE + L+FR
Sbjct: 397 HKNRTNMTYEKMSRALRHYYKLNIIRKEPGQRLLFR 432
>dbj|BAC21622.1| hypothetical protein [Macaca fascicularis]
Length = 553
Score = 32.3 bits (72), Expect = 2.5
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +2
Query: 281 ILASTSTYHEHFQH*KRKH*IINLPELEQQQ----VLVKEHHLDHHVRIQIS**AHWQSV 448
I AST+T + FQ + KH L L+Q V++ HHLDH +++ H V
Sbjct: 67 IKASTATAEQFFQKLRNKHEFTILVTLKQTHLNSGVILSVHHLDHRY-LELESSGHRNEV 125
Query: 449 H*HY 460
HY
Sbjct: 126 RLHY 129
>ref|NP_001978.1| ets variant gene 6; TEL1 oncogene [Homo sapiens]
gi|730927|sp|P41212|ETV6_HUMAN Transcription factor ETV6
(ETS-related protein Tel1) (Tel) (ETS translocation
variant 6) gi|511283|gb|AAA19786.1| t(5;12)
translocation breakpoint occurs after nucleotide 487
gi|27695076|gb|AAH43399.1| ets variant gene 6 (TEL
oncogene) [Homo sapiens]
Length = 452
Score = 32.3 bits (72), Expect = 2.5
Identities = 24/78 (30%), Positives = 40/78 (50%), Gaps = 8/78 (10%)
Frame = +3
Query: 147 LHTYIYVMHKERKYQKYLSYDSK--KLFR----TGY*KC-SNHKRKLCIT-EKYLLPLPH 302
L Y+Y + + +Y+ ++ ++ K K+FR G + NHK + +T EK L H
Sbjct: 341 LWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRH 400
Query: 303 IMSTSSIRKENIESLIFR 356
+ IRKE + L+FR
Sbjct: 401 YYKLNIIRKEPGQRLLFR 418
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 374,879,875
Number of Sequences: 1393205
Number of extensions: 7656391
Number of successful extensions: 36151
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 25956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34999
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
