Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002595A_C01 KMC002595A_c01
(822 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196527.1| inorganic pyrophosphatase - like protein; prote... 172 2e-57
gb|AAM64828.1| inorganic pyrophosphatase-like protein [Arabidops... 171 1e-41
ref|NP_501801.1| Inorganic pyrophosphatase [Caenorhabditis elega... 110 1e-30
pir||E88797 protein C47E12.4 [imported] - Caenorhabditis elegans 110 1e-30
emb|CAC42762.1| inorganic pyrophosphatase precursor [Chlamydomon... 134 2e-30
>ref|NP_196527.1| inorganic pyrophosphatase - like protein; protein id: At5g09650.1,
supported by cDNA: 33506., supported by cDNA:
gi_15028284, supported by cDNA: gi_19310710 [Arabidopsis
thaliana] gi|11358468|pir||T49933 inorganic
pyrophosphatase-like protein - Arabidopsis thaliana
gi|7671424|emb|CAB89365.1| inorganic
pyrophosphatase-like protein [Arabidopsis thaliana]
gi|9758993|dbj|BAB09520.1| inorganic
pyrophosphatase-like protein [Arabidopsis thaliana]
gi|12057177|emb|CAC19853.1| inorganic pyrophosphatase
[Arabidopsis thaliana] gi|15028285|gb|AAK76619.1|
putative inorganic pyrophosphatase [Arabidopsis
thaliana] gi|19310711|gb|AAL85086.1| putative inorganic
pyrophosphatase [Arabidopsis thaliana]
Length = 300
Score = 172 bits (436), Expect(2) = 2e-57
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = -2
Query: 821 EVEGAFGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASL 642
EVEG FGDNDPVDVVEIGE+QRKIGD+LKIKPL ALAMIDEGELDWKIVAISLDDPKA L
Sbjct: 166 EVEGCFGDNDPVDVVEIGETQRKIGDILKIKPLAALAMIDEGELDWKIVAISLDDPKAHL 225
Query: 641 VNDVDDVEKHFPGTLTAIRDWFRDYKIP 558
VNDV+DVEKHFPGTLTAIRDWFRDYKIP
Sbjct: 226 VNDVEDVEKHFPGTLTAIRDWFRDYKIP 253
Score = 73.2 bits (178), Expect(2) = 2e-57
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = -1
Query: 552 GKPANKFGLRNQAANKDYALKVITETNESWSRLIKRSIHAGELSL 418
GKPAN+FGL ++ ANKDYALK+I ETNESW++L+KRS+ AG+LSL
Sbjct: 255 GKPANRFGLGDKPANKDYALKIIQETNESWAKLVKRSVDAGDLSL 299
>gb|AAM64828.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana]
Length = 300
Score = 171 bits (433), Expect = 1e-41
Identities = 87/114 (76%), Positives = 93/114 (81%)
Frame = -2
Query: 821 EVEGAFGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASL 642
EVEG FGDNDPVDVVEIGE+QRKIGD+L IKPL ALAMIDEGELDWKIVAISLDDPKA L
Sbjct: 166 EVEGCFGDNDPVDVVEIGETQRKIGDILNIKPLAALAMIDEGELDWKIVAISLDDPKAHL 225
Query: 641 VNDVDDVEKHFPGTLTAIRDWFRDYKIP*WGNPLINLGSETRQQIRIMRLRSLQ 480
VNDV+DVEKHFPGTLTAIRDWFRDYKIP G P G + R L+ +Q
Sbjct: 226 VNDVEDVEKHFPGTLTAIRDWFRDYKIP-DGKPANRFGLGDKPANRDYALKIIQ 278
Score = 72.0 bits (175), Expect = 1e-11
Identities = 31/45 (68%), Positives = 41/45 (90%)
Frame = -1
Query: 552 GKPANKFGLRNQAANKDYALKVITETNESWSRLIKRSIHAGELSL 418
GKPAN+FGL ++ AN+DYALK+I ETNESW++L+KRS+ AG+LSL
Sbjct: 255 GKPANRFGLGDKPANRDYALKIIQETNESWAKLVKRSVDAGDLSL 299
>ref|NP_501801.1| Inorganic pyrophosphatase [Caenorhabditis elegans]
gi|14917011|sp|Q18680|IPYR_CAEEL Probable inorganic
pyrophosphatase (Pyrophosphate phospho-hydrolase)
(PPase) gi|7497567|pir||T20014 hypothetical protein
C47E12.4 - Caenorhabditis elegans
gi|5824411|emb|CAA93107.2| C. elegans UBA-1 protein
(corresponding sequence C47E12.4) [Caenorhabditis
elegans]
Length = 350
Score = 110 bits (274), Expect(2) = 1e-30
Identities = 50/85 (58%), Positives = 64/85 (74%)
Frame = -2
Query: 812 GAFGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASLVND 633
GA GDNDP+DV+E+G G VL++K LG LA+IDEGE DWK+VAI ++D A +ND
Sbjct: 178 GAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLND 237
Query: 632 VDDVEKHFPGTLTAIRDWFRDYKIP 558
+DDVEK +PG L A +WFR+YKIP
Sbjct: 238 IDDVEKVYPGLLAASVEWFRNYKIP 262
Score = 45.8 bits (107), Expect(2) = 1e-30
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1
Query: 552 GKPANKFGLRNQAANKDYALKVITETNESWSRLIKRS 442
GKPAN+F + N++YA KVI ETNE W LIK +
Sbjct: 264 GKPANEFAFNGEFKNREYAEKVIDETNEYWKTLIKEA 300
>pir||E88797 protein C47E12.4 [imported] - Caenorhabditis elegans
Length = 292
Score = 110 bits (274), Expect(2) = 1e-30
Identities = 50/85 (58%), Positives = 64/85 (74%)
Frame = -2
Query: 812 GAFGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASLVND 633
GA GDNDP+DV+E+G G VL++K LG LA+IDEGE DWK+VAI ++D A +ND
Sbjct: 120 GAKGDNDPIDVIEVGSKVAGRGAVLQVKVLGTLALIDEGETDWKLVAIDVNDENADKLND 179
Query: 632 VDDVEKHFPGTLTAIRDWFRDYKIP 558
+DDVEK +PG L A +WFR+YKIP
Sbjct: 180 IDDVEKVYPGLLAASVEWFRNYKIP 204
Score = 45.8 bits (107), Expect(2) = 1e-30
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -1
Query: 552 GKPANKFGLRNQAANKDYALKVITETNESWSRLIKRS 442
GKPAN+F + N++YA KVI ETNE W LIK +
Sbjct: 206 GKPANEFAFNGEFKNREYAEKVIDETNEYWKTLIKEA 242
>emb|CAC42762.1| inorganic pyrophosphatase precursor [Chlamydomonas reinhardtii]
Length = 280
Score = 134 bits (337), Expect = 2e-30
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = -2
Query: 812 GAFGDNDPVDVVEIGESQRKIGDVLKIKPLGALAMIDEGELDWKIVAISLDDPKASLVND 633
GA GDNDPVDVVEIG + K G V K+KP+G LAMID+GELDWK++AIS DDPKA+L ND
Sbjct: 148 GAAGDNDPVDVVEIGAAAAKRGGVYKVKPVGVLAMIDDGELDWKVIAISADDPKAALCND 207
Query: 632 VDDVEKHFPGTLTAIRDWFRDYKIP*WGNPLINLGSETR 516
V+DVEKHFPG + + +WFRDYKIP G P G + +
Sbjct: 208 VEDVEKHFPGEIQKVLEWFRDYKIP-DGKPANKFGYDNK 245
Score = 43.5 bits (101), Expect = 0.004
Identities = 22/47 (46%), Positives = 33/47 (69%), Gaps = 1/47 (2%)
Frame = -1
Query: 552 GKPANKFGLRNQAANKDYALKVITETNESWSRLIKRS-IHAGELSLV 415
GKPANKFG N+ NK++ L VI ET+E++ +L + ++ ELSL+
Sbjct: 234 GKPANKFGYDNKCMNKEFTLNVIKETHEAYVKLKSGARANSEELSLI 280
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 659,429,169
Number of Sequences: 1393205
Number of extensions: 13740475
Number of successful extensions: 39138
Number of sequences better than 10.0: 279
Number of HSP's better than 10.0 without gapping: 36156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38731
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 42576939184
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
