Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002594A_C01 KMC002594A_c01
(1387 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC84547.1| dicarboxylate/tricarboxylate carrier [Nicotiana ... 531 e-149
pir||T07405 oxoglutarate/malate translocator - potato gi|1486472... 524 e-147
emb|CAC84546.1| dicarboxylate/tricarboxylate carrier [Nicotiana ... 523 e-147
emb|CAC12820.1| mitochondrial 2-oxoglutarate/malate carrier prot... 523 e-147
emb|CAC84545.1| dicarboxylate/tricarboxylate carrier [Nicotiana ... 523 e-147
>emb|CAC84547.1| dicarboxylate/tricarboxylate carrier [Nicotiana tabacum]
Length = 300
Score = 531 bits (1368), Expect = e-149
Identities = 263/300 (87%), Positives = 279/300 (92%), Gaps = 2/300 (0%)
Frame = -1
Query: 1309 MGDEKKP--KVGVWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTSNMLK 1136
MGD+ K G WPT+KPF NGGASGMLATCVIQPIDMIKVRIQLGQGSA +VT MLK
Sbjct: 1 MGDKAKSTSSAGAWPTVKPFANGGASGMLATCVIQPIDMIKVRIQLGQGSAGEVTRTMLK 60
Query: 1135 NDGVGAFYKGLSAGLLRQATYTTARLGTFRILTSKAIEANDGKPLPLYQKALCGLTAGAI 956
N+G GAFYKGLSAGLLRQATYTTARLG+FR+LT+KAIEANDGKPLPLYQKALCGLTAGAI
Sbjct: 61 NEGFGAFYKGLSAGLLRQATYTTARLGSFRVLTNKAIEANDGKPLPLYQKALCGLTAGAI 120
Query: 955 GATVGSPADLALIRMQADATLPLHQRRHYTNAFHALYRIVADEGVLSLWKGAGPTVVRAM 776
GA GSPADLALIRMQADATLP+ QRR+YTNAFHALYRIVADEGVLSLWKGAGPTVVRAM
Sbjct: 121 GACFGSPADLALIRMQADATLPVAQRRNYTNAFHALYRIVADEGVLSLWKGAGPTVVRAM 180
Query: 775 ALNMGMLASYDQSVEFFKDSVGLGEASTVVAASSVSGFFAAACSLPFDYVKTQIQKMQPD 596
ALNMGMLASYDQSVEFFKD++G+GEA+TVV ASSVSGFFAAACSLPFDYVKTQIQKMQPD
Sbjct: 181 ALNMGMLASYDQSVEFFKDNLGMGEAATVVGASSVSGFFAAACSLPFDYVKTQIQKMQPD 240
Query: 595 AEGKYPYTGSLDCAAKTLKQGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKCLWL 416
A+GKYPYTGS DCA KTLK GGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQK+EK + L
Sbjct: 241 AQGKYPYTGSFDCAMKTLKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKVEKKIGL 300
>pir||T07405 oxoglutarate/malate translocator - potato gi|1486472|emb|CAA68164.1|
oxoglutarate malate translocator [Solanum tuberosum]
Length = 297
Score = 524 bits (1350), Expect = e-147
Identities = 258/295 (87%), Positives = 274/295 (92%)
Frame = -1
Query: 1300 EKKPKVGVWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTSNMLKNDGVG 1121
EK GVWPT+KPF+NGG SGMLATCVIQPIDMIKVRIQLGQGSA VT MLKN+G G
Sbjct: 3 EKPVSGGVWPTVKPFINGGVSGMLATCVIQPIDMIKVRIQLGQGSAADVTKTMLKNEGFG 62
Query: 1120 AFYKGLSAGLLRQATYTTARLGTFRILTSKAIEANDGKPLPLYQKALCGLTAGAIGATVG 941
AFYKGLSAGLLRQATYTTARLG+FRILT+KAIEAN+GKPLPLYQKALCGLTAGAIGATVG
Sbjct: 63 AFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANEGKPLPLYQKALCGLTAGAIGATVG 122
Query: 940 SPADLALIRMQADATLPLHQRRHYTNAFHALYRIVADEGVLSLWKGAGPTVVRAMALNMG 761
SPADLALIRMQADATLPL QRR+YTNAFHAL RI DEGVL+LWKGAGPTVVRAMALNMG
Sbjct: 123 SPADLALIRMQADATLPLAQRRNYTNAFHALSRIAVDEGVLALWKGAGPTVVRAMALNMG 182
Query: 760 MLASYDQSVEFFKDSVGLGEASTVVAASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKY 581
MLASYDQSVEFF+D++G+GEA+TVV ASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGK
Sbjct: 183 MLASYDQSVEFFRDNLGMGEAATVVGASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKL 242
Query: 580 PYTGSLDCAAKTLKQGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKCLWL 416
PYTGS DCA KTLK GGPFKFYTGFPVYC+RIAPHVMMTWIFLNQIQK+EK + L
Sbjct: 243 PYTGSFDCAMKTLKAGGPFKFYTGFPVYCIRIAPHVMMTWIFLNQIQKVEKKIGL 297
>emb|CAC84546.1| dicarboxylate/tricarboxylate carrier [Nicotiana tabacum]
Length = 295
Score = 523 bits (1347), Expect = e-147
Identities = 261/295 (88%), Positives = 273/295 (92%)
Frame = -1
Query: 1300 EKKPKVGVWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTSNMLKNDGVG 1121
EK GVWPT+KPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAV VT MLKN+G G
Sbjct: 1 EKPKSGGVWPTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVDVTKTMLKNEGFG 60
Query: 1120 AFYKGLSAGLLRQATYTTARLGTFRILTSKAIEANDGKPLPLYQKALCGLTAGAIGATVG 941
AFYKGLSAGLLRQATYTTARLG+FRILT+KAIEAN+GKPLPLYQKALCGLTAGAIGA G
Sbjct: 61 AFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANEGKPLPLYQKALCGLTAGAIGACFG 120
Query: 940 SPADLALIRMQADATLPLHQRRHYTNAFHALYRIVADEGVLSLWKGAGPTVVRAMALNMG 761
SPADLALIRMQADATLPL QRRHYTNAFHAL RIVADEGVL+LWKGAGPTVVRAMALNMG
Sbjct: 121 SPADLALIRMQADATLPLAQRRHYTNAFHALSRIVADEGVLALWKGAGPTVVRAMALNMG 180
Query: 760 MLASYDQSVEFFKDSVGLGEASTVVAASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKY 581
MLASYDQSVEF +D++G+ EA+TVV ASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGK
Sbjct: 181 MLASYDQSVEFCRDNLGMSEAATVVGASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKL 240
Query: 580 PYTGSLDCAAKTLKQGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKCLWL 416
PY+GS DCA KTLK GGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQK EK L L
Sbjct: 241 PYSGSFDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKAEKKLGL 295
>emb|CAC12820.1| mitochondrial 2-oxoglutarate/malate carrier protein [Nicotiana
tabacum]
Length = 297
Score = 523 bits (1347), Expect = e-147
Identities = 261/295 (88%), Positives = 273/295 (92%)
Frame = -1
Query: 1300 EKKPKVGVWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTSNMLKNDGVG 1121
EK GVWPT+KPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAV VT MLKN+G G
Sbjct: 3 EKPKSGGVWPTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVDVTKTMLKNEGFG 62
Query: 1120 AFYKGLSAGLLRQATYTTARLGTFRILTSKAIEANDGKPLPLYQKALCGLTAGAIGATVG 941
AFYKGLSAGLLRQATYTTARLG+FRILT+KAIEAN+GKPLPLYQKALCGLTAGAIGA G
Sbjct: 63 AFYKGLSAGLLRQATYTTARLGSFRILTNKAIEANEGKPLPLYQKALCGLTAGAIGACFG 122
Query: 940 SPADLALIRMQADATLPLHQRRHYTNAFHALYRIVADEGVLSLWKGAGPTVVRAMALNMG 761
SPADLALIRMQADATLPL QRRHYTNAFHAL RIVADEGVL+LWKGAGPTVVRAMALNMG
Sbjct: 123 SPADLALIRMQADATLPLAQRRHYTNAFHALSRIVADEGVLALWKGAGPTVVRAMALNMG 182
Query: 760 MLASYDQSVEFFKDSVGLGEASTVVAASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKY 581
MLASYDQSVEF +D++G+ EA+TVV ASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGK
Sbjct: 183 MLASYDQSVEFCRDNLGMSEAATVVGASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKL 242
Query: 580 PYTGSLDCAAKTLKQGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKCLWL 416
PY+GS DCA KTLK GGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQK EK L L
Sbjct: 243 PYSGSFDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKAEKKLGL 297
>emb|CAC84545.1| dicarboxylate/tricarboxylate carrier [Nicotiana tabacum]
Length = 297
Score = 523 bits (1346), Expect = e-147
Identities = 261/295 (88%), Positives = 273/295 (92%)
Frame = -1
Query: 1300 EKKPKVGVWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVQVTSNMLKNDGVG 1121
EK GVWPT+KPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAV VT MLKN+G G
Sbjct: 3 EKPKSGGVWPTVKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAVDVTKTMLKNEGFG 62
Query: 1120 AFYKGLSAGLLRQATYTTARLGTFRILTSKAIEANDGKPLPLYQKALCGLTAGAIGATVG 941
AFYKGLSAGLLRQATYTTARLG+FR LT+KAIEAN+GKPLPLYQKALCGLTAGAIGA VG
Sbjct: 63 AFYKGLSAGLLRQATYTTARLGSFRSLTNKAIEANEGKPLPLYQKALCGLTAGAIGACVG 122
Query: 940 SPADLALIRMQADATLPLHQRRHYTNAFHALYRIVADEGVLSLWKGAGPTVVRAMALNMG 761
SPADLALIRMQADATLPL QRRHYTNAFHAL RIVADEGVL+LWKGAGPTVVRAMALNMG
Sbjct: 123 SPADLALIRMQADATLPLAQRRHYTNAFHALSRIVADEGVLALWKGAGPTVVRAMALNMG 182
Query: 760 MLASYDQSVEFFKDSVGLGEASTVVAASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKY 581
MLASYDQSVEF +D++G+ EA+TVV ASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGK
Sbjct: 183 MLASYDQSVEFCRDNLGMSEAATVVGASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKL 242
Query: 580 PYTGSLDCAAKTLKQGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKLEKCLWL 416
PY+GS DCA KTLK GGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQK EK L L
Sbjct: 243 PYSGSFDCAMKTLKAGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQIQKAEKKLGL 297
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,228,964,484
Number of Sequences: 1393205
Number of extensions: 28810688
Number of successful extensions: 100688
Number of sequences better than 10.0: 887
Number of HSP's better than 10.0 without gapping: 82498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96329
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 90765238808
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
