Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002505A_C01 KMC002505A_c01
(885 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAA22399.1| hypothetical protein [Plasmodium yoelii yoelii] 36 0.68
ref|NP_524281.1| Odorant receptor 85d CG11742-PA gi|11386992|sp|... 33 7.5
>gb|EAA22399.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 383
Score = 36.2 bits (82), Expect = 0.68
Identities = 20/53 (37%), Positives = 33/53 (61%)
Frame = +2
Query: 677 ITINLELIINASKD*RKFWHNTGAMKAKHMACVVFMYKKGKYETEINRHQPYI 835
I I+L L+ N +KD +K W N GA++ K + VVF +++ + T+ +PYI
Sbjct: 51 IAISLRLLNNIAKDLKKKWLNDGALELKGNSEVVFEFEQKDF-TKTKNLKPYI 102
>ref|NP_524281.1| Odorant receptor 85d CG11742-PA gi|11386992|sp|Q9VHQ2|O85D_DROME
Putative odorant receptor 85d gi|7299048|gb|AAF54249.1|
CG11742-PA [Drosophila melanogaster]
Length = 412
Score = 32.7 bits (73), Expect = 7.5
Identities = 18/48 (37%), Positives = 28/48 (57%), Gaps = 1/48 (2%)
Frame = +2
Query: 86 TYSLTWAYIYLVCSGFYLHLAQKTKGTYSDSFIPFS-TVGISQYFIYL 226
TY+L WA YLVC F+L + Q + ++P+ + G S YF+Y+
Sbjct: 162 TYNLYWAVYYLVCD-FWLGMRQFERMLPYYCWVPWDWSTGYSYYFMYI 208
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 733,946,733
Number of Sequences: 1393205
Number of extensions: 15163057
Number of successful extensions: 29226
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29220
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 47939536764
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
