Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002488A_C01 KMC002488A_c01
(550 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK96877.1| SNF1 related protein kinase [Arabidopsis thaliana] 242 2e-63
ref|NP_188940.1| SNF1 related protein kinase (ATSRPK1); protein ... 242 2e-63
dbj|BAB11738.1| serine/threonine protein kinase [Arabidopsis tha... 240 7e-63
ref|NP_193194.1| SNF1 like protein kinase; protein id: At4g14580... 233 9e-61
dbj|BAB61199.1| OsPK4-like protein [Oryza sativa (japonica culti... 192 2e-48
>gb|AAK96877.1| SNF1 related protein kinase [Arabidopsis thaliana]
Length = 429
Score = 242 bits (618), Expect = 2e-63
Identities = 118/175 (67%), Positives = 145/175 (82%)
Frame = +2
Query: 26 AFPLEMERRQPSTSPPRIILGKYQLTRFLGRGNFAKVYQAVSLTDGTTVAVKMIDKSKTV 205
+ P + P+T+P +I+LGKY+L R LG G+FAKV+ A S+ VAVK+I+K KT+
Sbjct: 3 SLPQPQNQSSPATTPAKILLGKYELGRRLGSGSFAKVHLARSIESDELVAVKIIEKKKTI 62
Query: 206 DASMEPRIVREIDAMRRLQHHPNILKIHEVMATRTKIYLIVDYAGGGELFSKISRRGRLP 385
++ MEPRI+REIDAMRRL+HHPNILKIHEVMAT++KIYL+++ A GGELFSK+ RRGRLP
Sbjct: 63 ESGMEPRIIREIDAMRRLRHHPNILKIHEVMATKSKIYLVMELASGGELFSKVLRRGRLP 122
Query: 386 EPLARRYFQQLVSALCFCHRNGVAHRDLKPQNLLLDAEGNLKVSDFGLSALPEQL 550
E ARRYFQQL SAL F H++GVAHRD+KPQNLLLD +GNLKVSDFGLSALPE L
Sbjct: 123 ESTARRYFQQLASALRFSHQDGVAHRDVKPQNLLLDEQGNLKVSDFGLSALPEHL 177
>ref|NP_188940.1| SNF1 related protein kinase (ATSRPK1); protein id: At3g23000.1,
supported by cDNA: gi_13249112, supported by cDNA:
gi_13448038, supported by cDNA: gi_15451211, supported
by cDNA: gi_5478790, supported by cDNA: gi_9798600
[Arabidopsis thaliana] gi|5478791|dbj|BAA77716.2| SNF1
related protein kinase [Arabidopsis thaliana]
gi|9294189|dbj|BAB02091.1| SNF1 related protein kinase
[Arabidopsis thaliana]
gi|13249113|gb|AAK16682.1|AF290192_1 CBL-interacting
protein kinase 7 [Arabidopsis thaliana]
gi|13448039|gb|AAK26846.1|AF339148_1 SOS2-like protein
kinase PKS7 [Arabidopsis thaliana]
Length = 429
Score = 242 bits (618), Expect = 2e-63
Identities = 118/175 (67%), Positives = 145/175 (82%)
Frame = +2
Query: 26 AFPLEMERRQPSTSPPRIILGKYQLTRFLGRGNFAKVYQAVSLTDGTTVAVKMIDKSKTV 205
+ P + P+T+P +I+LGKY+L R LG G+FAKV+ A S+ VAVK+I+K KT+
Sbjct: 3 SLPQPQNQSSPATTPAKILLGKYELGRRLGSGSFAKVHLARSIESDELVAVKIIEKKKTI 62
Query: 206 DASMEPRIVREIDAMRRLQHHPNILKIHEVMATRTKIYLIVDYAGGGELFSKISRRGRLP 385
++ MEPRI+REIDAMRRL+HHPNILKIHEVMAT++KIYL+++ A GGELFSK+ RRGRLP
Sbjct: 63 ESGMEPRIIREIDAMRRLRHHPNILKIHEVMATKSKIYLVMELASGGELFSKVLRRGRLP 122
Query: 386 EPLARRYFQQLVSALCFCHRNGVAHRDLKPQNLLLDAEGNLKVSDFGLSALPEQL 550
E ARRYFQQL SAL F H++GVAHRD+KPQNLLLD +GNLKVSDFGLSALPE L
Sbjct: 123 ESTARRYFQQLASALRFSHQDGVAHRDVKPQNLLLDEQGNLKVSDFGLSALPEHL 177
>dbj|BAB11738.1| serine/threonine protein kinase [Arabidopsis thaliana]
Length = 429
Score = 240 bits (613), Expect = 7e-63
Identities = 117/175 (66%), Positives = 145/175 (82%)
Frame = +2
Query: 26 AFPLEMERRQPSTSPPRIILGKYQLTRFLGRGNFAKVYQAVSLTDGTTVAVKMIDKSKTV 205
+ P + P+T+P +I+LGK++L R LG G+FAKV+ A S+ VAVK+I+K KT+
Sbjct: 3 SLPQPQNQSSPATTPAKILLGKHELGRRLGSGSFAKVHLARSIESDELVAVKIIEKKKTI 62
Query: 206 DASMEPRIVREIDAMRRLQHHPNILKIHEVMATRTKIYLIVDYAGGGELFSKISRRGRLP 385
++ MEPRI+REIDAMRRL+HHPNILKIHEVMAT++KIYL+++ A GGELFSK+ RRGRLP
Sbjct: 63 ESGMEPRIIREIDAMRRLRHHPNILKIHEVMATKSKIYLVMELASGGELFSKVLRRGRLP 122
Query: 386 EPLARRYFQQLVSALCFCHRNGVAHRDLKPQNLLLDAEGNLKVSDFGLSALPEQL 550
E ARRYFQQL SAL F H++GVAHRD+KPQNLLLD +GNLKVSDFGLSALPE L
Sbjct: 123 ESTARRYFQQLASALRFSHQDGVAHRDVKPQNLLLDEQGNLKVSDFGLSALPEHL 177
>ref|NP_193194.1| SNF1 like protein kinase; protein id: At4g14580.1, supported by
cDNA: gi_13249502 [Arabidopsis thaliana]
gi|7446364|pir||C71408 probable protein kinase -
Arabidopsis thaliana gi|5302772|emb|CAB46060.1| SNF1
like protein kinase [Arabidopsis thaliana]
gi|7268164|emb|CAB78500.1| SNF1 like protein kinase
[Arabidopsis thaliana] gi|13249503|gb|AAG01367.1|
CBL-interacting protein kinase 4 [Arabidopsis thaliana]
Length = 426
Score = 233 bits (595), Expect = 9e-61
Identities = 112/165 (67%), Positives = 138/165 (82%)
Frame = +2
Query: 50 RQPSTSPPRIILGKYQLTRFLGRGNFAKVYQAVSLTDGTTVAVKMIDKSKTVDASMEPRI 229
+ P ++LGKY+L R LG G+FAKV+ A S++ G VA+K+IDK KT+D+ MEPRI
Sbjct: 7 KSPEKITGTVLLGKYELGRRLGSGSFAKVHVARSISTGELVAIKIIDKQKTIDSGMEPRI 66
Query: 230 VREIDAMRRLQHHPNILKIHEVMATRTKIYLIVDYAGGGELFSKISRRGRLPEPLARRYF 409
+REI+AMRRL +HPN+LKIHEVMAT++KIYL+V+YA GGELF+K+ R GRL E ARRYF
Sbjct: 67 IREIEAMRRLHNHPNVLKIHEVMATKSKIYLVVEYAAGGELFTKLIRFGRLNESAARRYF 126
Query: 410 QQLVSALCFCHRNGVAHRDLKPQNLLLDAEGNLKVSDFGLSALPE 544
QQL SAL FCHR+G+AHRD+KPQNLLLD +GNLKVSDFGLSALPE
Sbjct: 127 QQLASALSFCHRDGIAHRDVKPQNLLLDKQGNLKVSDFGLSALPE 171
>dbj|BAB61199.1| OsPK4-like protein [Oryza sativa (japonica cultivar-group)]
gi|20161310|dbj|BAB90235.1| OsPK4-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 474
Score = 192 bits (488), Expect = 2e-48
Identities = 89/162 (54%), Positives = 125/162 (76%)
Frame = +2
Query: 53 QPSTSPPRIILGKYQLTRFLGRGNFAKVYQAVSLTDGTTVAVKMIDKSKTVDASMEPRIV 232
+ ++ ++I+G+Y+L R LGRG FAKVY+A L G VA+K+ DK + ++
Sbjct: 2 ETTSQDSQVIMGRYKLGRLLGRGTFAKVYKAYKLATGEAVAIKVFDKEAVQRSGTVEQVK 61
Query: 233 REIDAMRRLQHHPNILKIHEVMATRTKIYLIVDYAGGGELFSKISRRGRLPEPLARRYFQ 412
RE+D MRR+ HH +++++HEVMATR++IY +++YA GGELF+++SR R PEP+ARRYFQ
Sbjct: 62 REVDVMRRV-HHRHVIRLHEVMATRSRIYFVMEYASGGELFTRLSRSPRFPEPVARRYFQ 120
Query: 413 QLVSALCFCHRNGVAHRDLKPQNLLLDAEGNLKVSDFGLSAL 538
QL++A+ FCH GV HRDLKP+NLLLDA G+LKV+DFGLSAL
Sbjct: 121 QLITAVEFCHSRGVYHRDLKPENLLLDARGDLKVTDFGLSAL 162
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 580,017,109
Number of Sequences: 1393205
Number of extensions: 16918918
Number of successful extensions: 303227
Number of sequences better than 10.0: 20133
Number of HSP's better than 10.0 without gapping: 124435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231350
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
