Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002475A_C02 KMC002475A_c02
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09538 acetyl-CoA carboxylase (EC 6.4.1.2) - alfalfa gi|495... 148 5e-35
pir||T07084 acetyl-CoA carboxylase (EC 6.4.1.2) A - soybean gi|9... 138 5e-32
gb|AAB63199.2| acetyl-CoA carboxylase [Phaseolus vulgaris] 137 1e-31
gb|AAA81579.1| acetyl-CoA carboxylase 137 2e-31
ref|NP_174850.2| acetyl-CoA carboxylase, putative; protein id: A... 102 5e-21
>pir||T09538 acetyl-CoA carboxylase (EC 6.4.1.2) - alfalfa
gi|495725|gb|AAB42144.1| acetyl-CoA carboxylase [Medicago
sativa]
Length = 2257
Score = 148 bits (374), Expect = 5e-35
Identities = 74/80 (92%), Positives = 77/80 (95%)
Frame = -2
Query: 626 KGREEAWLDDEAFFRWKADPANYEDKLKELRVQKLLLQLTNIGDSALDLQALPQGLAALL 447
KGRE+AWLDDEAFFRW+ DPANYEDKLKELRVQ+LLLQLTNIGDSALDLQALPQGLAALL
Sbjct: 2178 KGREDAWLDDEAFFRWRDDPANYEDKLKELRVQRLLLQLTNIGDSALDLQALPQGLAALL 2237
Query: 446 SKLEASSRDKLTDELRKVLG 387
SKLEASSRDKL ELRKVLG
Sbjct: 2238 SKLEASSRDKLISELRKVLG 2257
>pir||T07084 acetyl-CoA carboxylase (EC 6.4.1.2) A - soybean
gi|992917|gb|AAA75528.1| acetyl CoA carboxylase
Length = 2261
Score = 138 bits (348), Expect = 5e-32
Identities = 70/80 (87%), Positives = 74/80 (92%)
Frame = -2
Query: 626 KGREEAWLDDEAFFRWKADPANYEDKLKELRVQKLLLQLTNIGDSALDLQALPQGLAALL 447
KGRE+AWLDDEAFFRWK P+NYE+KLKELRVQK+LLQLTNIGDSALDLQALPQGLAALL
Sbjct: 2182 KGREDAWLDDEAFFRWKDIPSNYENKLKELRVQKVLLQLTNIGDSALDLQALPQGLAALL 2241
Query: 446 SKLEASSRDKLTDELRKVLG 387
SKLE R KLTDELRKVLG
Sbjct: 2242 SKLEPLGRVKLTDELRKVLG 2261
>gb|AAB63199.2| acetyl-CoA carboxylase [Phaseolus vulgaris]
Length = 406
Score = 137 bits (345), Expect = 1e-31
Identities = 68/79 (86%), Positives = 74/79 (93%)
Frame = -2
Query: 623 GREEAWLDDEAFFRWKADPANYEDKLKELRVQKLLLQLTNIGDSALDLQALPQGLAALLS 444
GRE+AWLDDEAFF+WK +PA+YE+KLKELRVQK+LLQLTNIGDSALDLQALPQGLAALLS
Sbjct: 328 GREDAWLDDEAFFKWKNNPAHYENKLKELRVQKVLLQLTNIGDSALDLQALPQGLAALLS 387
Query: 443 KLEASSRDKLTDELRKVLG 387
LE S R KLTDELRKVLG
Sbjct: 388 NLEPSGRGKLTDELRKVLG 406
>gb|AAA81579.1| acetyl-CoA carboxylase
Length = 1321
Score = 137 bits (344), Expect = 2e-31
Identities = 69/80 (86%), Positives = 74/80 (92%)
Frame = -2
Query: 626 KGREEAWLDDEAFFRWKADPANYEDKLKELRVQKLLLQLTNIGDSALDLQALPQGLAALL 447
KGRE+AWLDDEAFFRWK P+NYE+KLKELRVQ++LLQLTNIGDSALDLQALPQGLAALL
Sbjct: 1242 KGREDAWLDDEAFFRWKDIPSNYENKLKELRVQEVLLQLTNIGDSALDLQALPQGLAALL 1301
Query: 446 SKLEASSRDKLTDELRKVLG 387
SKLE R KLTDELRKVLG
Sbjct: 1302 SKLEPLGRVKLTDELRKVLG 1321
>ref|NP_174850.2| acetyl-CoA carboxylase, putative; protein id: At1g36180.1, supported
by cDNA: gi_11138219 [Arabidopsis thaliana]
Length = 1755
Score = 102 bits (253), Expect = 5e-21
Identities = 51/80 (63%), Positives = 63/80 (78%)
Frame = -2
Query: 626 KGREEAWLDDEAFFRWKADPANYEDKLKELRVQKLLLQLTNIGDSALDLQALPQGLAALL 447
KG+EEAW DD+ FF WK + +NYE KL ELR QKLL QL IG+S+ DLQALPQGLA LL
Sbjct: 1677 KGKEEAWTDDQLFFTWKDNVSNYEQKLSELRTQKLLNQLAEIGNSS-DLQALPQGLANLL 1735
Query: 446 SKLEASSRDKLTDELRKVLG 387
+K++ S R++L D +RKVLG
Sbjct: 1736 NKVDLSRREELVDAIRKVLG 1755
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 498,240,672
Number of Sequences: 1393205
Number of extensions: 9895531
Number of successful extensions: 23727
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 23168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23708
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
