Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002459A_C01 KMC002459A_c01
(1037 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF75749.1|AF261139_1 dehydration-induced protein ERD15 [Lyco... 131 2e-29
ref|NP_181674.1| ERD15 protein; protein id: At2g41430.1, support... 109 6e-23
gb|AAM64638.1| ERD15 protein [Arabidopsis thaliana] 106 7e-22
dbj|BAC16068.1| P0496C02.30 [Oryza sativa (japonica cultivar-gro... 94 5e-18
ref|NP_567425.1| Expressed protein; protein id: At4g14270.1, sup... 81 3e-14
>gb|AAF75749.1|AF261139_1 dehydration-induced protein ERD15 [Lycopersicon esculentum]
Length = 156
Score = 131 bits (329), Expect = 2e-29
Identities = 71/169 (42%), Positives = 108/169 (63%), Gaps = 1/169 (0%)
Frame = -3
Query: 990 MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHKEEDFGESG 811
MALVSG S LNPNAPLF+P+ +R+VEDFSP+WW LV +STWF DYW SQ++ E++G
Sbjct: 1 MALVSGGRSTLNPNAPLFVPSFVRQVEDFSPEWWNLVTTSTWFHDYWMSQNQGEEYG--- 57
Query: 810 INSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQEFPVRDIDPNDGKKPLNG 631
+DV +++ E +DL +D++ LN +E +FE+ S E+++ ++ P G
Sbjct: 58 ---AGNDVADLLPENIDLNVDEDILN-MEAQFEEFLQSSENEQQGIKSSLYGVNAMPQYG 113
Query: 630 LNKDAKALLKNL-EPKSPKERGLKSPKHLEKPAQHVNIKSAPSRIHQPR 487
L D AL++ L P+SP + PK+ EKP++ V+ +++ I QPR
Sbjct: 114 LPSD--ALIRTLSSPRSP----IGPPKYFEKPSKIVSPRNSFRSIQQPR 156
>ref|NP_181674.1| ERD15 protein; protein id: At2g41430.1, supported by cDNA: 31388.,
supported by cDNA: gi_13926319, supported by cDNA:
gi_15912242, supported by cDNA: gi_17473678, supported
by cDNA: gi_20148614, supported by cDNA: gi_710625
[Arabidopsis thaliana] gi|7452401|pir||T02438
dehydration-induced protein (ERD15) [imported] -
Arabidopsis thaliana gi|710626|dbj|BAA06384.1| ERD15
protein [Arabidopsis thaliana] gi|3241941|gb|AAC23728.1|
ERD15 protein [Arabidopsis thaliana]
gi|13926320|gb|AAK49625.1|AF372909_1 F13H10.2/F13H10.2
[Arabidopsis thaliana] gi|15912243|gb|AAL08255.1|
At2g41429/F13H10.2 [Arabidopsis thaliana]
gi|17473679|gb|AAL38296.1| dehydration-induced protein
(ERD15) [Arabidopsis thaliana]
gi|20148615|gb|AAM10198.1| dehydration-induced protein
(ERD15) [Arabidopsis thaliana]
gi|20197424|gb|AAM15070.1| ERD15 protein [Arabidopsis
thaliana] gi|27363320|gb|AAO11579.1| At2g41430/F13H10.2
[Arabidopsis thaliana]
Length = 163
Score = 109 bits (273), Expect = 6e-23
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 7/175 (4%)
Frame = -3
Query: 990 MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHKE-----ED 826
MA+VSGR S LNP+APLFIPAA+R+VEDFSP+WW+LV +STW+ DYW SQ ++ D
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 825 FGESGINSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQEFPVRDIDPNDGK 646
GE+ + DV +++ E+ D D ED F + DQ F R +
Sbjct: 61 NGENENGGGHIDVADLLPESFDFD-DMED-------FFDTDAAEFDQGFDGRMYYQAPSE 112
Query: 645 KPLNGLNKDAKALLKNLEPKSPKERGLKSPKHLEKPAQHVN--IKSAPSRIHQPR 487
G K+ + + K+ +SP+ ++ K+ EKPA+ N + +AP IHQPR
Sbjct: 113 ---FGFGKNGEMVKKSSGNRSPRSI-VEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163
>gb|AAM64638.1| ERD15 protein [Arabidopsis thaliana]
Length = 163
Score = 106 bits (264), Expect = 7e-22
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 7/175 (4%)
Frame = -3
Query: 990 MALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHKE-----ED 826
MA+VSGR S LNP+APLFIPAA+R+VEDFSP+WW+LV +STW+ DYW SQ ++ D
Sbjct: 1 MAMVSGRRSTLNPDAPLFIPAAVRQVEDFSPEWWQLVTTSTWYPDYWISQQQQGADGFYD 60
Query: 825 FGESGINSTNDDVENMISETLDLGIDQEDLNFLEHEFEQLAMSHEDQEFPVRDIDPNDGK 646
GE+ + DV +++ E+ D ED F + DQ F R +
Sbjct: 61 NGENENGGGHIDVADLLPESFYFD-DMED-------FFDTDAAEFDQGFDGRMYYQAPSE 112
Query: 645 KPLNGLNKDAKALLKNLEPKSPKERGLKSPKHLEKPAQHVN--IKSAPSRIHQPR 487
G K+ + + K+ +SP+ ++ K+ EKPA+ N + +AP IHQPR
Sbjct: 113 ---FGFGKNGEMVKKSSGNRSPRSI-VEPAKYAEKPAKWGNQRVAAAPRNIHQPR 163
>dbj|BAC16068.1| P0496C02.30 [Oryza sativa (japonica cultivar-group)]
gi|24414178|dbj|BAC22420.1| contains ESTs
C96778(C10671),D22278(C10671)~unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 149
Score = 93.6 bits (231), Expect = 5e-18
Identities = 66/172 (38%), Positives = 86/172 (49%), Gaps = 12/172 (6%)
Frame = -3
Query: 966 SDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHK-------EEDFGESGI 808
S LNPNA FIPAA R VEDFSP+WWELV+++ WFRD+W QH+ EED
Sbjct: 2 SSLNPNAAPFIPAAFRRVEDFSPEWWELVKTTAWFRDHWFRQHQMYEDAAAEEDHHRQVF 61
Query: 807 NSTNDDVENMI-SETLDL--GIDQEDLNFLEHEFEQLAMSHEDQEFPVRDIDPNDGKKPL 637
+DD+ ++ ++LDL +D +DL + DP KP
Sbjct: 62 ---DDDLAALLPDDSLDLLDMVDTDDLFYTP--------------------DPPVHHKPT 98
Query: 636 NGLNKDAKALLKNLEPKSPKERGLKSPKHLEKPAQHVNIKSAPSR--IHQPR 487
DA +L+ L SP+ G +H EKPAQ V K +R IHQPR
Sbjct: 99 TTPTLDAD-VLRALSLNSPRLGGAGMVRHAEKPAQFVAAKGGAARHVIHQPR 149
>ref|NP_567425.1| Expressed protein; protein id: At4g14270.1, supported by cDNA:
30129., supported by cDNA: gi_15028002, supported by
cDNA: gi_20259214 [Arabidopsis thaliana]
gi|15028003|gb|AAK76532.1| unknown protein [Arabidopsis
thaliana] gi|20259215|gb|AAM14323.1| unknown protein
[Arabidopsis thaliana] gi|26452861|dbj|BAC43509.1|
unknown protein [Arabidopsis thaliana]
Length = 143
Score = 80.9 bits (198), Expect = 3e-14
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = -3
Query: 993 LMALVSGRSSDLNPNAPLFIPAALREVEDFSPQWWELVESSTWFRDYWSSQHKEEDF-GE 817
+ A + R S LNPNAP+F P REVEDFSP+WW+LV +S WFRD+W S + E +F G
Sbjct: 1 MTATIDRRLSTLNPNAPVFDPVEFREVEDFSPKWWDLVTTSKWFRDFWLSANSENEFLGG 60
Query: 816 SGINSTNDDVENMISET 766
+ ++ E MI+ +
Sbjct: 61 DDFSVMEEEFEEMIASS 77
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 834,017,535
Number of Sequences: 1393205
Number of extensions: 17912621
Number of successful extensions: 47786
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 44870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47662
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60980933767
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
