Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002451A_C01 KMC002451A_c01
(627 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA77087.1| MtN6 [Medicago truncatula] 124 8e-28
emb|CAB43503.1| nodulin 6 [Medicago truncatula] 124 8e-28
gb|AAL86737.1|AF434718_1 nodulin 6l [Glycine max] 115 4e-25
gb|AAL32756.1| nodulin / glutamate-ammonia ligase-like protein [... 95 9e-19
pir||T46164 nodulin / glutamate-ammonia ligase-like protein - Ar... 95 9e-19
>emb|CAA77087.1| MtN6 [Medicago truncatula]
Length = 419
Score = 124 bits (312), Expect = 8e-28
Identities = 59/69 (85%), Positives = 66/69 (95%)
Frame = -1
Query: 627 EQAPMSKVMFSTDSYAFPELFYLGAKNAREVVFTVLRDACIDGELSVPEAVEAAKDLFAR 448
EQAP++KVMFSTD+YAFPELFYLGAKNAREVVFTVLRD+CIDG+L+VPEAVE AKDLFAR
Sbjct: 350 EQAPLNKVMFSTDAYAFPELFYLGAKNAREVVFTVLRDSCIDGDLTVPEAVEVAKDLFAR 409
Query: 447 NAIQFYKIT 421
N+I FY IT
Sbjct: 410 NSINFYNIT 418
>emb|CAB43503.1| nodulin 6 [Medicago truncatula]
Length = 423
Score = 124 bits (312), Expect = 8e-28
Identities = 59/69 (85%), Positives = 66/69 (95%)
Frame = -1
Query: 627 EQAPMSKVMFSTDSYAFPELFYLGAKNAREVVFTVLRDACIDGELSVPEAVEAAKDLFAR 448
EQAP++KVMFSTD+YAFPELFYLGAKNAREVVFTVLRD+CIDG+L+VPEAVE AKDLFAR
Sbjct: 354 EQAPLNKVMFSTDAYAFPELFYLGAKNAREVVFTVLRDSCIDGDLTVPEAVEVAKDLFAR 413
Query: 447 NAIQFYKIT 421
N+I FY IT
Sbjct: 414 NSINFYNIT 422
>gb|AAL86737.1|AF434718_1 nodulin 6l [Glycine max]
Length = 431
Score = 115 bits (289), Expect = 4e-25
Identities = 54/67 (80%), Positives = 62/67 (91%)
Frame = -1
Query: 621 APMSKVMFSTDSYAFPELFYLGAKNAREVVFTVLRDACIDGELSVPEAVEAAKDLFARNA 442
AP+ KVMFSTD+Y FPE FYLGAKN+REVVF+VL DACIDGELS+PEAVEAAKD+ ARNA
Sbjct: 357 APLDKVMFSTDAYTFPETFYLGAKNSREVVFSVLHDACIDGELSIPEAVEAAKDILARNA 416
Query: 441 IQFYKIT 421
I+FYKI+
Sbjct: 417 IRFYKIS 423
>gb|AAL32756.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis
thaliana] gi|20259966|gb|AAM13330.1| nodulin /
glutamate-ammonia ligase-like protein [Arabidopsis
thaliana]
Length = 340
Score = 94.7 bits (234), Expect = 9e-19
Identities = 44/68 (64%), Positives = 55/68 (80%)
Frame = -1
Query: 621 APMSKVMFSTDSYAFPELFYLGAKNAREVVFTVLRDACIDGELSVPEAVEAAKDLFARNA 442
A + KVMFSTD YA PE +YLGAK AREV+F VL DAC G+LS+ EA++AAKD+F+RN+
Sbjct: 12 ASIKKVMFSTDGYASPETYYLGAKKAREVIFLVLSDACASGDLSLMEAIDAAKDIFSRNS 71
Query: 441 IQFYKITI 418
I FYK+ I
Sbjct: 72 IGFYKLNI 79
>pir||T46164 nodulin / glutamate-ammonia ligase-like protein - Arabidopsis
thaliana gi|6630738|emb|CAB64221.1| nodulin /
glutamate-ammonia ligase-like protein [Arabidopsis
thaliana]
Length = 845
Score = 94.7 bits (234), Expect = 9e-19
Identities = 44/68 (64%), Positives = 55/68 (80%)
Frame = -1
Query: 621 APMSKVMFSTDSYAFPELFYLGAKNAREVVFTVLRDACIDGELSVPEAVEAAKDLFARNA 442
A + KVMFSTD YA PE +YLGAK AREV+F VL DAC G+LS+ EA++AAKD+F+RN+
Sbjct: 318 ASIKKVMFSTDGYASPETYYLGAKKAREVIFLVLSDACASGDLSLMEAIDAAKDIFSRNS 377
Query: 441 IQFYKITI 418
I FYK+ I
Sbjct: 378 IGFYKLNI 385
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,321,242
Number of Sequences: 1393205
Number of extensions: 8992210
Number of successful extensions: 15563
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15555
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
