Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002408A_C01 KMC002408A_c01
(554 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC15418.1| 14-3-3 protein homolog [Maackia amurensis] 87 1e-16
sp|P42654|143B_VICFA 14-3-3-LIKE PROTEIN B (VFA-1433B) gi|107654... 87 2e-16
sp|Q96453|143D_SOYBN 14-3-3-LIKE PROTEIN D (SGF14D) gi|1575731|g... 86 3e-16
gb|AAD27824.2| 14-3-3 protein [Populus x canescens] 77 1e-13
dbj|BAB68527.1| 14-3-3 protein [Nicotiana tabacum] 77 2e-13
>gb|AAC15418.1| 14-3-3 protein homolog [Maackia amurensis]
Length = 261
Score = 87.4 bits (215), Expect = 1e-16
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = -2
Query: 553 ESYKDSTLIMQLLRDNLTLWTSDIPEEGEDSLKANDTAQVGGGEDAE 413
ESYKDSTLIMQLLRDNLTLWTSDIPE+GED+ KAN TA++GGGEDAE
Sbjct: 215 ESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKANGTAKLGGGEDAE 261
>sp|P42654|143B_VICFA 14-3-3-LIKE PROTEIN B (VFA-1433B) gi|1076543|pir||S52900 14-3-3
protein homolog Vfa-1433b - fava bean
gi|695767|emb|CAA88416.1| 14-3-3 brain protein homolog
[Vicia faba]
Length = 261
Score = 86.7 bits (213), Expect = 2e-16
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -2
Query: 553 ESYKDSTLIMQLLRDNLTLWTSDIPEEGEDSLKANDTAQVGGGEDAE 413
ESYKDSTLIMQLLRDNLTLWTSDIPE+GEDS KAN TA+ GGG+DAE
Sbjct: 215 ESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKANGTAKFGGGDDAE 261
>sp|Q96453|143D_SOYBN 14-3-3-LIKE PROTEIN D (SGF14D) gi|1575731|gb|AAB09583.1| SGF14D
[Glycine max]
Length = 261
Score = 85.9 bits (211), Expect = 3e-16
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -2
Query: 553 ESYKDSTLIMQLLRDNLTLWTSDIPEEGEDSLKANDTAQVGGGEDAE 413
ESYKDSTLIMQLLRDNLTLWTSDIPE+GED+ K N TA++GGGEDAE
Sbjct: 215 ESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQKVNGTAKLGGGEDAE 261
>gb|AAD27824.2| 14-3-3 protein [Populus x canescens]
Length = 260
Score = 77.0 bits (188), Expect = 1e-13
Identities = 38/47 (80%), Positives = 41/47 (86%)
Frame = -2
Query: 553 ESYKDSTLIMQLLRDNLTLWTSDIPEEGEDSLKANDTAQVGGGEDAE 413
ESYKDSTLIMQLLRDNLTLWTSDIPE+GED K +A+ GGGEDAE
Sbjct: 215 ESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQ-KMETSAKAGGGEDAE 260
>dbj|BAB68527.1| 14-3-3 protein [Nicotiana tabacum]
Length = 261
Score = 76.6 bits (187), Expect = 2e-13
Identities = 35/47 (74%), Positives = 41/47 (86%)
Frame = -2
Query: 553 ESYKDSTLIMQLLRDNLTLWTSDIPEEGEDSLKANDTAQVGGGEDAE 413
+SYKDSTLIMQLLRDNLTLWTSD+PE+ ED+ K + T + GGGEDAE
Sbjct: 215 DSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQKGDATNKAGGGEDAE 261
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,528,599
Number of Sequences: 1393205
Number of extensions: 10361627
Number of successful extensions: 24070
Number of sequences better than 10.0: 282
Number of HSP's better than 10.0 without gapping: 23421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24054
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
