Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002401A_C01 KMC002401A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181023.1| fatty acid hydroxylase (FAH1); protein id: At2g... 136 2e-31
gb|AAK09233.1|AC084320_20 putative fatty acid hydroxylase [Oryza... 131 6e-30
ref|NP_193819.1| fatty acid hydroxylase - like protein; protein ... 128 4e-29
gb|EAA05163.1| agCP7053 [Anopheles gambiae str. PEST] 79 3e-14
emb|CAD21081.1| related to fatty acid hydroxylase [Neurospora cr... 79 3e-14
>ref|NP_181023.1| fatty acid hydroxylase (FAH1); protein id: At2g34770.1, supported
by cDNA: gi_15215595, supported by cDNA: gi_2736146
[Arabidopsis thaliana] gi|7484965|pir||T01359 fatty acid
hydroxylase (EC 1.14.15.-) FAH1 - Arabidopsis thaliana
gi|2736147|gb|AAB94072.1| fatty acid hydroxylase Fah1p
[Arabidopsis thaliana] gi|3132481|gb|AAC16270.1| fatty
acid hydroxylase (FAH1) [Arabidopsis thaliana]
gi|15215596|gb|AAK91343.1| At2g34770/T29F13.2
[Arabidopsis thaliana] gi|23308163|gb|AAN18051.1|
At2g34770/T29F13.2 [Arabidopsis thaliana]
Length = 237
Score = 136 bits (342), Expect = 2e-31
Identities = 62/78 (79%), Positives = 67/78 (85%)
Frame = -1
Query: 536 STRSTAPALLGGGLLGYVMYDCTHYYLHHAQPKTEIPRNLKKYHLNHHFRIQDQGFGITS 357
ST STAPAL GGG+LGYVMYD THYYLHHAQP + +NLKKYHLNHHFRIQD+GFGITS
Sbjct: 158 STPSTAPALFGGGMLGYVMYDVTHYYLHHAQPTRPVTKNLKKYHLNHHFRIQDKGFGITS 217
Query: 356 SLWDKVFGTLPQSKAEAK 303
SLWD VFGTLP +KA K
Sbjct: 218 SLWDIVFGTLPTTKAPRK 235
>gb|AAK09233.1|AC084320_20 putative fatty acid hydroxylase [Oryza sativa (japonica
cultivar-group)]
Length = 237
Score = 131 bits (329), Expect = 6e-30
Identities = 58/79 (73%), Positives = 65/79 (81%)
Frame = -1
Query: 536 STRSTAPALLGGGLLGYVMYDCTHYYLHHAQPKTEIPRNLKKYHLNHHFRIQDQGFGITS 357
+T + PAL GGGLLGYVMYDCTHYYLHH QP E +NLK+YHLNHHFRIQ++GFGITS
Sbjct: 158 ATPTITPALFGGGLLGYVMYDCTHYYLHHGQPSKEPAKNLKRYHLNHHFRIQNKGFGITS 217
Query: 356 SLWDKVFGTLPQSKAEAKS 300
SLWD VFGTLP SK K+
Sbjct: 218 SLWDYVFGTLPPSKTTGKN 236
>ref|NP_193819.1| fatty acid hydroxylase - like protein; protein id: At4g20870.1,
supported by cDNA: gi_14994242, supported by cDNA:
gi_16648749, supported by cDNA: gi_20856314 [Arabidopsis
thaliana] gi|7486980|pir||T10629 hypothetical protein
T13K14.30 - Arabidopsis thaliana
gi|5262777|emb|CAB45882.1| fatty acid hydroxylase-like
protein [Arabidopsis thaliana]
gi|7268883|emb|CAB79087.1| fatty acid hydroxylase-like
protein [Arabidopsis thaliana]
gi|14994243|gb|AAK73256.1| fatty acid hydroxylase-like
protein [Arabidopsis thaliana]
gi|16648750|gb|AAL25567.1| AT4g20870/T13K14_30
[Arabidopsis thaliana] gi|20856315|gb|AAM26659.1|
AT4g20870/T13K14_30 [Arabidopsis thaliana]
Length = 237
Score = 128 bits (322), Expect = 4e-29
Identities = 59/78 (75%), Positives = 66/78 (83%)
Frame = -1
Query: 536 STRSTAPALLGGGLLGYVMYDCTHYYLHHAQPKTEIPRNLKKYHLNHHFRIQDQGFGITS 357
+T +TAPA+LGG L GYVMYD THYYLHH QPK ++LKKYHLNHHFRIQD+G+GITS
Sbjct: 158 ATPATAPAILGGILFGYVMYDITHYYLHHGQPKEPTFKHLKKYHLNHHFRIQDKGYGITS 217
Query: 356 SLWDKVFGTLPQSKAEAK 303
SLWDKVFGTLP KA AK
Sbjct: 218 SLWDKVFGTLPGIKAAAK 235
>gb|EAA05163.1| agCP7053 [Anopheles gambiae str. PEST]
Length = 390
Score = 79.3 bits (194), Expect = 3e-14
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = -1
Query: 509 LGGGLLGYVMYDCTHYYLHHAQPKTEIPRNLKKYHLNHHFRIQDQGFGITSSLWDKVFGT 330
L GGL+GY++YD HYYLH+ P ++K+YH +HHF DQG+GI+S WDK+FGT
Sbjct: 318 LAGGLIGYLVYDMIHYYLHYGSPAGGHLYHMKRYHYSHHFVHHDQGYGISSDFWDKLFGT 377
>emb|CAD21081.1| related to fatty acid hydroxylase [Neurospora crassa]
Length = 359
Score = 79.0 bits (193), Expect = 3e-14
Identities = 35/64 (54%), Positives = 43/64 (66%)
Frame = -1
Query: 521 APALLGGGLLGYVMYDCTHYYLHHAQPKTEIPRNLKKYHLNHHFRIQDQGFGITSSLWDK 342
A A GG+ GY +YD THY+LHH Q + LKKYHL HHF + GFG+TS+ WDK
Sbjct: 288 ATAAFCGGVFGYTLYDMTHYFLHH-QNLPAYYKELKKYHLAHHFLDYENGFGVTSAFWDK 346
Query: 341 VFGT 330
+FGT
Sbjct: 347 IFGT 350
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 467,110,052
Number of Sequences: 1393205
Number of extensions: 9859613
Number of successful extensions: 21548
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 20996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21533
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
