Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002337A_C01 KMC002337A_c01
(666 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_566671.1| expressed protein; protein id: At3g20920.1, sup... 139 3e-32
gb|AAM65686.1| unknown [Arabidopsis thaliana] 139 3e-32
dbj|BAB31657.2| unnamed protein product [Mus musculus] 37 0.31
gb|AAH48535.1| Unknown (protein for IMAGE:6740526) [Mus musculus] 37 0.31
dbj|BAA13382.2| Similar to Plasmodium falciparum glutamic acid-r... 36 0.53
>ref|NP_566671.1| expressed protein; protein id: At3g20920.1, supported by cDNA:
41717., supported by cDNA: gi_15810582, supported by
cDNA: gi_21280984 [Arabidopsis thaliana]
gi|9293998|dbj|BAB01901.1| gene_id:MFD22.3~unknown
protein [Arabidopsis thaliana]
gi|15810583|gb|AAL07179.1| unknown protein [Arabidopsis
thaliana] gi|21280985|gb|AAM45115.1| unknown protein
[Arabidopsis thaliana]
Length = 365
Score = 139 bits (351), Expect = 3e-32
Identities = 68/125 (54%), Positives = 87/125 (69%)
Frame = -3
Query: 664 FRFWPKKDEEERPKWTPRIFYAVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWS 485
FRFWPKKDEEE PKWT R+FY VVA++ ++LLR HAPDEAARARYQ+R+SNIIDDVLEWS
Sbjct: 240 FRFWPKKDEEEPPKWTSRLFYTVVAIVVVMLLRRHAPDEAARARYQRRMSNIIDDVLEWS 299
Query: 484 PSLALSGMMDKQQNVSNATGSSDAASQASQTGPEDAAPADGSETFTEQYDTEEVMDNIED 305
P LALSG+M+ QQ V+ +++++ A GP+ D ET E D + + E
Sbjct: 300 PKLALSGLMENQQPVNITDAANNSSDSAG--GPDQTEEVDLDETQGEDLDETQGKEEAEG 357
Query: 304 AGEED 290
+ D
Sbjct: 358 WTDSD 362
>gb|AAM65686.1| unknown [Arabidopsis thaliana]
Length = 365
Score = 139 bits (351), Expect = 3e-32
Identities = 68/125 (54%), Positives = 87/125 (69%)
Frame = -3
Query: 664 FRFWPKKDEEERPKWTPRIFYAVVAVLFILLLRHHAPDEAARARYQKRVSNIIDDVLEWS 485
FRFWPKKDEEE PKWT R+FY VVA++ ++LLR HAPDEAARARYQ+R+SNIIDDVLEWS
Sbjct: 240 FRFWPKKDEEEPPKWTSRLFYTVVAIVVVMLLRRHAPDEAARARYQRRMSNIIDDVLEWS 299
Query: 484 PSLALSGMMDKQQNVSNATGSSDAASQASQTGPEDAAPADGSETFTEQYDTEEVMDNIED 305
P LALSG+M+ QQ V+ +++++ A GP+ D ET E D + + E
Sbjct: 300 PKLALSGLMENQQPVNITDAANNSSDSAG--GPDQTEEVDLDETQGEDLDETQGKEEAEG 357
Query: 304 AGEED 290
+ D
Sbjct: 358 WTDSD 362
>dbj|BAB31657.2| unnamed protein product [Mus musculus]
Length = 151
Score = 36.6 bits (83), Expect = 0.31
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = -3
Query: 466 GMMDKQQNVSNATGSSDAASQASQTGPEDAAPADGSETFTEQYDTEEVMDNIEDAGEEDK 287
G M KQ N + ++GSSD S A + PE+ +D SE+ + ++ D+ ED+
Sbjct: 44 GAMKKQANKAASSGSSDRDSSAESSAPEEGEVSD-SESSSSSSSSD------SDSSSEDE 96
Query: 286 QHHD*RGNHI 257
+ HD G +
Sbjct: 97 EFHDGYGEDL 106
>gb|AAH48535.1| Unknown (protein for IMAGE:6740526) [Mus musculus]
Length = 201
Score = 36.6 bits (83), Expect = 0.31
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = -3
Query: 466 GMMDKQQNVSNATGSSDAASQASQTGPEDAAPADGSETFTEQYDTEEVMDNIEDAGEEDK 287
G M KQ N + ++GSSD S A + PE+ +D SE+ + ++ D+ ED+
Sbjct: 84 GAMKKQANKAASSGSSDRDSSAESSAPEEGEVSD-SESSSSSSSSD------SDSSSEDE 136
Query: 286 QHHD*RGNHI 257
+ HD G +
Sbjct: 137 EFHDGYGEDL 146
>dbj|BAA13382.2| Similar to Plasmodium falciparum glutamic acid-rich protein
precursor (A54514) [Homo sapiens]
Length = 702
Score = 35.8 bits (81), Expect = 0.53
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -3
Query: 466 GMMDKQQNVSNATGSSDAASQASQTGPEDAAPADGSETFTEQYDTEEVMDNIEDAGEEDK 287
G M KQ N + ++GSSD S A + PE+ +D + + D+ ED+
Sbjct: 116 GTMKKQANKTASSGSSDKDSSAESSAPEEGEVSDSDSNSSSS-------SSDSDSSSEDE 168
Query: 286 QHHD*RGNHI 257
+ HD G +
Sbjct: 169 EFHDGYGEDL 178
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 542,360,955
Number of Sequences: 1393205
Number of extensions: 11167189
Number of successful extensions: 31328
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31221
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28855580904
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
