Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002286A_C01 KMC002286A_c01
(490 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196311.1| receptor protein kinase-like protein; protein i... 81 5e-15
ref|NP_194594.1| leucine-rich repeat transmembrane protein kinas... 62 3e-09
ref|NP_172335.1| CLAVATA1 receptor kinase( CLV1); protein id: At... 58 5e-08
ref|NP_199777.1| receptor protein kinase; protein id: At5g49660.... 56 2e-07
dbj|BAC42540.1| putative receptor protein kinase [Arabidopsis th... 56 2e-07
>ref|NP_196311.1| receptor protein kinase-like protein; protein id: At5g06940.1
[Arabidopsis thaliana] gi|9759550|dbj|BAB11152.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 872
Score = 81.3 bits (199), Expect = 5e-15
Identities = 42/77 (54%), Positives = 57/77 (73%), Gaps = 1/77 (1%)
Frame = -1
Query: 484 QAEETESSDSLDIVKWVRRKVNITNGVHQVLDPRI-SHACHQEMVGALDIALRCTSVVPE 308
+AEE S +SLDIVK VRRK+N+T+G QVLD +I S +C +M LDIAL CT+V E
Sbjct: 789 KAEEGSSGESLDIVKQVRRKINLTDGAAQVLDQKILSDSCQSDMRKTLDIALDCTAVAAE 848
Query: 307 KRPSMVEVVRGLQSLES 257
KRPS+V+V++ L+ + S
Sbjct: 849 KRPSLVKVIKLLEGISS 865
>ref|NP_194594.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At4g28650.1 [Arabidopsis thaliana]
gi|7434423|pir||T10659 probable serine/threonine-specific
protein kinase (EC 2.7.1.-) T5F17.100 - Arabidopsis
thaliana gi|7269720|emb|CAB81453.1| receptor protein
kinase-like protein [Arabidopsis thaliana]
Length = 1013
Score = 62.4 bits (150), Expect = 3e-09
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = -1
Query: 490 GRQAEETESSDSLDIVKWVRRKVNITNGVHQVLDPRISHA--CHQEMVGALDIALRCTSV 317
GR+ E E +S+DIV+WVRRK+ + + LDP + + +EM+ L IAL CT+
Sbjct: 902 GRRPLEPEFGESVDIVEWVRRKIRDNISLEEALDPNVGNCRYVQEEMLLVLQIALLCTTK 961
Query: 316 VPEKRPSMVEVVRGLQSLESRTCIANLQDTNEESS 212
+P+ RPSM +V+ L + R ++NEE++
Sbjct: 962 LPKDRPSMRDVISMLGEAKPR----RKSNSNEENT 992
>ref|NP_172335.1| CLAVATA1 receptor kinase( CLV1); protein id: At1g08590.1 [Arabidopsis
thaliana] gi|7434430|pir||T00712 protein kinase homolog
F22O13.7 - Arabidopsis thaliana
gi|9802553|gb|AAF99755.1|AC003981_5 F22O13.7 [Arabidopsis
thaliana]
Length = 1029
Score = 58.2 bits (139), Expect = 5e-08
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = -1
Query: 490 GRQAEETESSDSLDIVKWVRRKVNITNGVHQVLDPRISHACH---QEMVGALDIALRCTS 320
G+ + DS+D+V+W+RRKV + +V+D I+ C +EM+ AL IAL CT+
Sbjct: 925 GKMPIDPSFEDSIDVVEWIRRKVKKNESLEEVIDASIAGDCKHVIEEMLLALRIALLCTA 984
Query: 319 VVPEKRPSMVEVVRGLQSLESR 254
+P+ RPS+ +V+ L + R
Sbjct: 985 KLPKDRPSIRDVITMLAEAKPR 1006
>ref|NP_199777.1| receptor protein kinase; protein id: At5g49660.1 [Arabidopsis
thaliana]
Length = 966
Score = 56.2 bits (134), Expect = 2e-07
Identities = 26/71 (36%), Positives = 45/71 (62%)
Frame = -1
Query: 490 GRQAEETESSDSLDIVKWVRRKVNITNGVHQVLDPRISHACHQEMVGALDIALRCTSVVP 311
G++ ++ ++ +IV WV K++ G+ + LD R+S + +M+ AL +A+RCTS P
Sbjct: 861 GKKPVDSCFGENKNIVNWVSTKIDTKEGLIETLDKRLSESSKADMINALRVAIRCTSRTP 920
Query: 310 EKRPSMVEVVR 278
RP+M EVV+
Sbjct: 921 TIRPTMNEVVQ 931
>dbj|BAC42540.1| putative receptor protein kinase [Arabidopsis thaliana]
Length = 966
Score = 56.2 bits (134), Expect = 2e-07
Identities = 26/71 (36%), Positives = 45/71 (62%)
Frame = -1
Query: 490 GRQAEETESSDSLDIVKWVRRKVNITNGVHQVLDPRISHACHQEMVGALDIALRCTSVVP 311
G++ ++ ++ +IV WV K++ G+ + LD R+S + +M+ AL +A+RCTS P
Sbjct: 861 GKKPVDSCFGENKNIVNWVSTKIDTKEGLIETLDKRLSESSKADMINALRVAIRCTSRTP 920
Query: 310 EKRPSMVEVVR 278
RP+M EVV+
Sbjct: 921 TIRPTMNEVVQ 931
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 400,061,613
Number of Sequences: 1393205
Number of extensions: 8189273
Number of successful extensions: 21680
Number of sequences better than 10.0: 412
Number of HSP's better than 10.0 without gapping: 21077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21596
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 14271597018
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
