Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002278A_C01 KMC002278A_c01
(1029 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD53185.1|AF181096_1 ferric leghemoglobin reductase [Vigna u... 316 e-111
pir||T08854 dihydrolipoamide dehydrogenase (EC 1.8.1.4) 1 [simil... 314 e-110
pir||T06332 dihydrolipoamide dehydrogenase (EC 1.8.1.4) 2 precur... 307 e-110
sp|P31023|DLDH_PEA Dihydrolipoamide dehydrogenase, mitochondrial... 311 e-110
pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine De... 311 e-110
>gb|AAD53185.1|AF181096_1 ferric leghemoglobin reductase [Vigna unguiculata]
Length = 523
Score = 316 bits (809), Expect(2) = e-111
Identities = 162/186 (87%), Positives = 169/186 (90%)
Frame = -1
Query: 807 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYTNPEVAYVGKTE 628
VSGVYAIGDVIPGPMLAHKAEEDGVACVE+IAGKVGHVDYDKVPGVVYT PEVAYVGKTE
Sbjct: 339 VSGVYAIGDVIPGPMLAHKAEEDGVACVEFIAGKVGHVDYDKVPGVVYTTPEVAYVGKTE 398
Query: 627 EQVKASGVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETDQILGVHIMASNAGELIHE 448
EQVKA GVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETD+ILGVHIMA NAGELIHE
Sbjct: 399 EQVKALGVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETDKILGVHIMAPNAGELIHE 458
Query: 447 AAIALQYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI*RAWLVTSMFSFSFLSND 268
AAIALQYDASSEDIARVCHAHPTMSEA+KEAAMATYDKP ++WL+ F F+
Sbjct: 459 AAIALQYDASSEDIARVCHAHPTMSEAVKEAAMATYDKPHSHMKSWLLLHSLLFIFV-QQ 517
Query: 267 FTMT*R 250
FTMT R
Sbjct: 518 FTMTWR 523
Score = 109 bits (272), Expect(2) = e-111
Identities = 56/73 (76%), Positives = 62/73 (84%)
Frame = -3
Query: 1027 KLKTRVVESILHGDGVKLTIEPAAGGDQTTLEADVVLVSAGRTPYTAGLGLEKIGVETDK 848
+LKT+VV GDGVKLT+EPAAGGDQT LE DVVLVSAGRTP+TAGLGL+KIGVETDK
Sbjct: 266 QLKTKVVGVDTSGDGVKLTLEPAAGGDQTILETDVVLVSAGRTPFTAGLGLDKIGVETDK 325
Query: 847 GGRSLVNDRFATN 809
R LVN+RF TN
Sbjct: 326 IRRILVNERFTTN 338
>pir||T08854 dihydrolipoamide dehydrogenase (EC 1.8.1.4) 1 [similarity] -
soybean gi|546360|gb|AAB30526.1| ferric leghemoglobin
reductase; FLbR [Glycine max]
Length = 523
Score = 314 bits (804), Expect(2) = e-110
Identities = 159/186 (85%), Positives = 170/186 (90%)
Frame = -1
Query: 807 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYTNPEVAYVGKTE 628
VSGVYAIGDVIPGPMLAHKAEEDGVACVEY+ GKVGHVDYDKVPGVVYTNPEVA VGKTE
Sbjct: 339 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYLTGKVGHVDYDKVPGVVYTNPEVASVGKTE 398
Query: 627 EQVKASGVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETDQILGVHIMASNAGELIHE 448
EQVK +GVEYRVGKFPF+ANSRAKAIDNAEGLVKI+AEKETD+ILGVHIMA NAGELIHE
Sbjct: 399 EQVKETGVEYRVGKFPFLANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHE 458
Query: 447 AAIALQYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI*RAWLVTSMFSFSFLSND 268
AAIALQYDASSEDIARVCHAHPTMSEA+KEAAMATYDKP ++WL+ S F F+ +
Sbjct: 459 AAIALQYDASSEDIARVCHAHPTMSEAVKEAAMATYDKPHSHLKSWLLLSSLVFIFV-QE 517
Query: 267 FTMT*R 250
FTMT R
Sbjct: 518 FTMTWR 523
Score = 109 bits (272), Expect(2) = e-110
Identities = 54/73 (73%), Positives = 64/73 (86%)
Frame = -3
Query: 1027 KLKTRVVESILHGDGVKLTIEPAAGGDQTTLEADVVLVSAGRTPYTAGLGLEKIGVETDK 848
KLKT+VV GDGVKLT+EP+AGG+QT +EADVVLVSAGRTP+T+GL L+KIGVETDK
Sbjct: 266 KLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDK 325
Query: 847 GGRSLVNDRFATN 809
GR LVN+RF+TN
Sbjct: 326 LGRILVNERFSTN 338
>pir||T06332 dihydrolipoamide dehydrogenase (EC 1.8.1.4) 2 precursor
[similarity] - soybean gi|3309269|gb|AAC26053.1| ferric
leghemoglobin reductase-2 precursor [Glycine max]
Length = 500
Score = 307 bits (786), Expect(2) = e-110
Identities = 154/162 (95%), Positives = 157/162 (96%)
Frame = -1
Query: 807 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYTNPEVAYVGKTE 628
VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYT PEVA VGKTE
Sbjct: 339 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYTMPEVASVGKTE 398
Query: 627 EQVKASGVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETDQILGVHIMASNAGELIHE 448
EQVK GVEYRVGKFPF+ANSRAKAIDNAEGLVKILAEKETD+ILGVHIMA NAGELIHE
Sbjct: 399 EQVKELGVEYRVGKFPFLANSRAKAIDNAEGLVKILAEKETDKILGVHIMAPNAGELIHE 458
Query: 447 AAIALQYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI 322
AAIALQYDASSEDIARVCHAHPTMSEA+KEAAMATYDKPIHI
Sbjct: 459 AAIALQYDASSEDIARVCHAHPTMSEAVKEAAMATYDKPIHI 500
Score = 116 bits (290), Expect(2) = e-110
Identities = 60/73 (82%), Positives = 65/73 (88%)
Frame = -3
Query: 1027 KLKTRVVESILHGDGVKLTIEPAAGGDQTTLEADVVLVSAGRTPYTAGLGLEKIGVETDK 848
KLKT+VV GDGVKLT+EPAAGGDQTTLEADVVLVSAGRTP+TA LGL+KIGVETDK
Sbjct: 266 KLKTKVVGVDTSGDGVKLTLEPAAGGDQTTLEADVVLVSAGRTPFTAELGLDKIGVETDK 325
Query: 847 GGRSLVNDRFATN 809
GR LVN+RFATN
Sbjct: 326 IGRILVNERFATN 338
>sp|P31023|DLDH_PEA Dihydrolipoamide dehydrogenase, mitochondrial precursor (Glycine
cleavage system L protein) gi|984678|emb|CAA44729.1|
lipoamide dehydrogenase [Pisum sativum]
gi|6723874|emb|CAA45066.2| dihydrolipoamide
dehydrogenase [Pisum sativum]
Length = 501
Score = 311 bits (797), Expect(2) = e-110
Identities = 154/162 (95%), Positives = 159/162 (98%)
Frame = -1
Query: 807 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYTNPEVAYVGKTE 628
VSGVYAIGDVIPGPMLAHKAEEDGVACVEY+AGKVGHVDYDKVPGVVYTNPEVA VGKTE
Sbjct: 340 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTE 399
Query: 627 EQVKASGVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETDQILGVHIMASNAGELIHE 448
EQVK +GVEYRVGKFPFMANSRAKAIDNAEGLVKI+AEKETD+ILGVHIMA NAGELIHE
Sbjct: 400 EQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHE 459
Query: 447 AAIALQYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI 322
AAIALQYDASSEDIARVCHAHPTMSEA+KEAAMATYDKPIHI
Sbjct: 460 AAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI 501
Score = 109 bits (272), Expect(2) = e-110
Identities = 54/73 (73%), Positives = 64/73 (86%)
Frame = -3
Query: 1027 KLKTRVVESILHGDGVKLTIEPAAGGDQTTLEADVVLVSAGRTPYTAGLGLEKIGVETDK 848
KLKT+VV GDGVKLT+EP+AGG+QT +EADVVLVSAGRTP+T+GL L+KIGVETDK
Sbjct: 267 KLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDK 326
Query: 847 GGRSLVNDRFATN 809
GR LVN+RF+TN
Sbjct: 327 LGRILVNERFSTN 339
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum gi|9955322|pdb|1DXL|B Chain B,
Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum gi|9955323|pdb|1DXL|C Chain C,
Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum gi|9955324|pdb|1DXL|D Chain D,
Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 311 bits (797), Expect(2) = e-110
Identities = 154/162 (95%), Positives = 159/162 (98%)
Frame = -1
Query: 807 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYIAGKVGHVDYDKVPGVVYTNPEVAYVGKTE 628
VSGVYAIGDVIPGPMLAHKAEEDGVACVEY+AGKVGHVDYDKVPGVVYTNPEVA VGKTE
Sbjct: 309 VSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGKVGHVDYDKVPGVVYTNPEVASVGKTE 368
Query: 627 EQVKASGVEYRVGKFPFMANSRAKAIDNAEGLVKILAEKETDQILGVHIMASNAGELIHE 448
EQVK +GVEYRVGKFPFMANSRAKAIDNAEGLVKI+AEKETD+ILGVHIMA NAGELIHE
Sbjct: 369 EQVKETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHE 428
Query: 447 AAIALQYDASSEDIARVCHAHPTMSEALKEAAMATYDKPIHI 322
AAIALQYDASSEDIARVCHAHPTMSEA+KEAAMATYDKPIHI
Sbjct: 429 AAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYDKPIHI 470
Score = 109 bits (272), Expect(2) = e-110
Identities = 54/73 (73%), Positives = 64/73 (86%)
Frame = -3
Query: 1027 KLKTRVVESILHGDGVKLTIEPAAGGDQTTLEADVVLVSAGRTPYTAGLGLEKIGVETDK 848
KLKT+VV GDGVKLT+EP+AGG+QT +EADVVLVSAGRTP+T+GL L+KIGVETDK
Sbjct: 236 KLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDK 295
Query: 847 GGRSLVNDRFATN 809
GR LVN+RF+TN
Sbjct: 296 LGRILVNERFSTN 308
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 914,937,832
Number of Sequences: 1393205
Number of extensions: 21140063
Number of successful extensions: 59153
Number of sequences better than 10.0: 809
Number of HSP's better than 10.0 without gapping: 54707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58469
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 60153138286
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
