Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002196A_C02 KMC002196A_c02
(956 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA11417.1| ATP sulfurylase [Brassica juncea] 308 3e-89
gb|AAM63185.1| ATP sulfurylase, putative [Arabidopsis thaliana] 307 1e-88
ref|NP_188929.1| ATP sulfurylase, putative; protein id: At3g2289... 307 1e-88
gb|AAA21570.1| ATP sulfurylase 307 1e-88
gb|AAF19185.1|AF198964_1 ATP sulfurylase [Arabidopsis thaliana] 307 1e-88
>emb|CAA11417.1| ATP sulfurylase [Brassica juncea]
Length = 461
Score = 308 bits (788), Expect(2) = 3e-89
Identities = 144/150 (96%), Positives = 148/150 (98%)
Frame = -2
Query: 955 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 776
DDVPL WRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV
Sbjct: 287 DDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 346
Query: 775 GRDPAGMSHPVEKKDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP 596
GRDPAGM HPVEK+DLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP
Sbjct: 347 GRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP 406
Query: 595 QDFVFISGTKMRTLARNKENPPNGFMCPGG 506
QDF+FISGTKMRTLA+NKENPP+GFMCPGG
Sbjct: 407 QDFLFISGTKMRTLAKNKENPPDGFMCPGG 436
Score = 44.3 bits (103), Expect(2) = 3e-89
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 507 GWKVLVDYYDSVAVSSNGKIPEAVPA 430
GW+VLVDYYDS+ + NG++PE VPA
Sbjct: 436 GWQVLVDYYDSLTPAGNGRLPEVVPA 461
>gb|AAM63185.1| ATP sulfurylase, putative [Arabidopsis thaliana]
Length = 463
Score = 307 bits (786), Expect(2) = 1e-88
Identities = 143/150 (95%), Positives = 148/150 (98%)
Frame = -2
Query: 955 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 776
DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV
Sbjct: 289 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 348
Query: 775 GRDPAGMSHPVEKKDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP 596
GRDPAGM HPVEK+DLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDPSRP
Sbjct: 349 GRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRP 408
Query: 595 QDFVFISGTKMRTLARNKENPPNGFMCPGG 506
QDF+FISGTKMRTLA+N ENPP+GFMCPGG
Sbjct: 409 QDFLFISGTKMRTLAKNNENPPDGFMCPGG 438
Score = 42.7 bits (99), Expect(2) = 1e-88
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 507 GWKVLVDYYDSVAVSSNGKIPEAVP 433
GWKVLVDYY+S+ + NG++PE VP
Sbjct: 438 GWKVLVDYYESLTPAGNGRLPEVVP 462
>ref|NP_188929.1| ATP sulfurylase, putative; protein id: At3g22890.1, supported by
cDNA: 20342., supported by cDNA: gi_13877582, supported
by cDNA: gi_15292870, supported by cDNA: gi_15809803,
supported by cDNA: gi_17978730, supported by cDNA:
gi_20258904, supported by cDNA: gi_452469 [Arabidopsis
thaliana] gi|11994718|dbj|BAB03034.1| ATP
sulfurylase/APS kinase [Arabidopsis thaliana]
gi|13877583|gb|AAK43869.1|AF370492_1 ATP sulfurylase/APS
kinase [Arabidopsis thaliana] gi|15292871|gb|AAK92806.1|
putative ATP sulfurylase [Arabidopsis thaliana]
gi|15809804|gb|AAL06830.1| AT3g22890/F5N5_6 [Arabidopsis
thaliana] gi|17978731|gb|AAL47359.1| ATP sulfurylase/APS
kinase [Arabidopsis thaliana] gi|20258905|gb|AAM14146.1|
putative ATP sulfurylase [Arabidopsis thaliana]
gi|27311865|gb|AAO00898.1| Unknown protein [Arabidopsis
thaliana]
Length = 463
Score = 307 bits (786), Expect(2) = 1e-88
Identities = 143/150 (95%), Positives = 148/150 (98%)
Frame = -2
Query: 955 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 776
DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV
Sbjct: 289 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 348
Query: 775 GRDPAGMSHPVEKKDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP 596
GRDPAGM HPVEK+DLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDPSRP
Sbjct: 349 GRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRP 408
Query: 595 QDFVFISGTKMRTLARNKENPPNGFMCPGG 506
QDF+FISGTKMRTLA+N ENPP+GFMCPGG
Sbjct: 409 QDFLFISGTKMRTLAKNNENPPDGFMCPGG 438
Score = 42.7 bits (99), Expect(2) = 1e-88
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 507 GWKVLVDYYDSVAVSSNGKIPEAVP 433
GWKVLVDYY+S+ + NG++PE VP
Sbjct: 438 GWKVLVDYYESLTPAGNGRLPEVVP 462
>gb|AAA21570.1| ATP sulfurylase
Length = 463
Score = 307 bits (786), Expect(2) = 1e-88
Identities = 143/150 (95%), Positives = 148/150 (98%)
Frame = -2
Query: 955 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 776
DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV
Sbjct: 289 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 348
Query: 775 GRDPAGMSHPVEKKDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP 596
GRDPAGM HPVEK+DLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDPSRP
Sbjct: 349 GRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRP 408
Query: 595 QDFVFISGTKMRTLARNKENPPNGFMCPGG 506
QDF+FISGTKMRTLA+N ENPP+GFMCPGG
Sbjct: 409 QDFLFISGTKMRTLAKNNENPPDGFMCPGG 438
Score = 42.7 bits (99), Expect(2) = 1e-88
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 507 GWKVLVDYYDSVAVSSNGKIPEAVP 433
GWKVLVDYY+S+ + NG++PE VP
Sbjct: 438 GWKVLVDYYESLTPAGNGRLPEVVP 462
>gb|AAF19185.1|AF198964_1 ATP sulfurylase [Arabidopsis thaliana]
Length = 463
Score = 307 bits (786), Expect(2) = 1e-88
Identities = 143/150 (95%), Positives = 148/150 (98%)
Frame = -2
Query: 955 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 776
DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV
Sbjct: 289 DDVPLDWRMKQHEKVLEDGVLDPETTVVSIFPSPMHYAGPTEVQWHAKARINAGANFYIV 348
Query: 775 GRDPAGMSHPVEKKDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPSRP 596
GRDPAGM HPVEK+DLYDADHGKKVLSMAPGLERLNILPF+VAAYDKTQGKMAFFDPSRP
Sbjct: 349 GRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRP 408
Query: 595 QDFVFISGTKMRTLARNKENPPNGFMCPGG 506
QDF+FISGTKMRTLA+N ENPP+GFMCPGG
Sbjct: 409 QDFLFISGTKMRTLAKNNENPPDGFMCPGG 438
Score = 42.7 bits (99), Expect(2) = 1e-88
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 507 GWKVLVDYYDSVAVSSNGKIPEAVP 433
GWKVLVDYY+S+ + NG++PE VP
Sbjct: 438 GWKVLVDYYESLTPAGNGRLPEVVP 462
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 896,086,461
Number of Sequences: 1393205
Number of extensions: 21645024
Number of successful extensions: 55703
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 51334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55424
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 54078381240
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
