Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002185A_C01 KMC002185A_c01
(676 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T45934 hypothetical protein F5K20.240 - Arabidopsis thalian... 177 9e-44
ref|NP_190962.2| mitochondrial carrier protein family; protein i... 177 9e-44
ref|NP_191123.1| mitochondrial carrier protein family; protein i... 173 2e-42
gb|AAM63657.1| Ca-dependent solute carrier-like protein [Arabido... 171 1e-41
gb|AAM91520.1| putative mitochondrial carrier protein [Arabidops... 162 4e-39
>pir||T45934 hypothetical protein F5K20.240 - Arabidopsis thaliana
gi|7630014|emb|CAB88356.1| putative protein [Arabidopsis
thaliana]
Length = 358
Score = 177 bits (450), Expect = 9e-44
Identities = 84/120 (70%), Positives = 101/120 (84%)
Frame = -3
Query: 674 SIAISFSVYESLRSLWISRRPDDSSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVG 495
S+AISF+ YE+ ++ W+S RP+DS+AVVSL C SLSG+ SST FPLDLVRRRMQLEG G
Sbjct: 239 SLAISFAAYETFKTFWLSHRPNDSNAVVSLGCGSLSGIVSSTATFPLDLVRRRMQLEGAG 298
Query: 494 GRACVYNTGMCGAFQCIIKNEGVRGLYRGILPEYYKVVPGVGIAFMTYETLKRLLSSTPS 315
GRA VY TG+ G F+ I K EG+RGLYRGI+PEYYKVVPGVGIAFMT+E LK+LLS+ P+
Sbjct: 299 GRARVYTTGLFGTFKHIFKTEGMRGLYRGIIPEYYKVVPGVGIAFMTFEELKKLLSTVPN 358
Score = 56.2 bits (134), Expect = 4e-07
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = -3
Query: 593 VSLACASLSGVASSTVIFPLDLVRRRMQLEGVGGRACVYNTGMCGAFQCIIKNEGVRGLY 414
V L+G+ +++ +PLDLVR R+ +GVG AF+ I + EG+ GLY
Sbjct: 178 VHFVSGGLAGLTAASATYPLDLVRTRLSAQGVGH-----------AFRTICREEGILGLY 226
Query: 413 RGILPEYYKVVPGVGIAFMTYETLKRL-LSSTPS 315
+G+ V P + I+F YET K LS P+
Sbjct: 227 KGLGATLLGVGPSLAISFAAYETFKTFWLSHRPN 260
Score = 36.6 bits (83), Expect = 0.32
Identities = 25/94 (26%), Positives = 40/94 (41%), Gaps = 1/94 (1%)
Frame = -3
Query: 596 VVSLACASLSGVASSTVIFPLDLVRRRMQLEGVGGRACVYNT-GMCGAFQCIIKNEGVRG 420
V L ++G S T PL + Q++G+ A + ++ + I+K EG R
Sbjct: 70 VERLLAGGIAGAFSKTCTAPLARLTILFQIQGMQSEAAILSSPNIWHEASRIVKEEGFRA 129
Query: 419 LYRGILPEYYKVVPGVGIAFMTYETLKRLLSSTP 318
++G L +P + F YE K L S P
Sbjct: 130 FWKGNLVTVAHRLPYGAVNFYAYEEYKTFLHSNP 163
>ref|NP_190962.2| mitochondrial carrier protein family; protein id: At3g53940.1,
supported by cDNA: gi_17064803, supported by cDNA:
gi_20259827 [Arabidopsis thaliana]
gi|17064804|gb|AAL32556.1| putative protein [Arabidopsis
thaliana] gi|20259828|gb|AAM13261.1| putative protein
[Arabidopsis thaliana]
Length = 365
Score = 177 bits (450), Expect = 9e-44
Identities = 84/120 (70%), Positives = 101/120 (84%)
Frame = -3
Query: 674 SIAISFSVYESLRSLWISRRPDDSSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVG 495
S+AISF+ YE+ ++ W+S RP+DS+AVVSL C SLSG+ SST FPLDLVRRRMQLEG G
Sbjct: 246 SLAISFAAYETFKTFWLSHRPNDSNAVVSLGCGSLSGIVSSTATFPLDLVRRRMQLEGAG 305
Query: 494 GRACVYNTGMCGAFQCIIKNEGVRGLYRGILPEYYKVVPGVGIAFMTYETLKRLLSSTPS 315
GRA VY TG+ G F+ I K EG+RGLYRGI+PEYYKVVPGVGIAFMT+E LK+LLS+ P+
Sbjct: 306 GRARVYTTGLFGTFKHIFKTEGMRGLYRGIIPEYYKVVPGVGIAFMTFEELKKLLSTVPN 365
Score = 57.8 bits (138), Expect = 1e-07
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = -3
Query: 593 VSLACASLSGVASSTVIFPLDLVRRRMQLEGVGGRACVYNTGMCGAFQCIIKNEGVRGLY 414
V L+G+ +++ +PLDLVR R+ + R +Y G+ AF+ I + EG+ GLY
Sbjct: 178 VHFVSGGLAGLTAASATYPLDLVRTRLSAQ----RNSIYYQGVGHAFRTICREEGILGLY 233
Query: 413 RGILPEYYKVVPGVGIAFMTYETLKRL-LSSTPS 315
+G+ V P + I+F YET K LS P+
Sbjct: 234 KGLGATLLGVGPSLAISFAAYETFKTFWLSHRPN 267
Score = 36.6 bits (83), Expect = 0.32
Identities = 25/94 (26%), Positives = 40/94 (41%), Gaps = 1/94 (1%)
Frame = -3
Query: 596 VVSLACASLSGVASSTVIFPLDLVRRRMQLEGVGGRACVYNT-GMCGAFQCIIKNEGVRG 420
V L ++G S T PL + Q++G+ A + ++ + I+K EG R
Sbjct: 70 VERLLAGGIAGAFSKTCTAPLARLTILFQIQGMQSEAAILSSPNIWHEASRIVKEEGFRA 129
Query: 419 LYRGILPEYYKVVPGVGIAFMTYETLKRLLSSTP 318
++G L +P + F YE K L S P
Sbjct: 130 FWKGNLVTVAHRLPYGAVNFYAYEEYKTFLHSNP 163
>ref|NP_191123.1| mitochondrial carrier protein family; protein id: At3g55640.1,
supported by cDNA: 260615., supported by cDNA:
gi_13877984, supported by cDNA: gi_17104714 [Arabidopsis
thaliana] gi|11277065|pir||T47703 Ca-dependent solute
carrier-like protein - Arabidopsis thaliana
gi|7263552|emb|CAB81589.1| Ca-dependent solute
carrier-like protein [Arabidopsis thaliana]
gi|13877985|gb|AAK44070.1|AF370255_1 putative
Ca-dependent solute carrier protein [Arabidopsis
thaliana] gi|17104715|gb|AAL34246.1| putative
Ca-dependent solute carrier protein [Arabidopsis
thaliana]
Length = 332
Score = 173 bits (438), Expect = 2e-42
Identities = 86/112 (76%), Positives = 93/112 (82%)
Frame = -3
Query: 674 SIAISFSVYESLRSLWISRRPDDSSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVG 495
SIAISFSVYESLRS W S RP DS +VSLAC SLSG+ASST FPLDLVRRR QLEG+G
Sbjct: 211 SIAISFSVYESLRSYWRSTRPHDSPIMVSLACGSLSGIASSTATFPLDLVRRRKQLEGIG 270
Query: 494 GRACVYNTGMCGAFQCIIKNEGVRGLYRGILPEYYKVVPGVGIAFMTYETLK 339
GRA VY TG+ G + I++ EG RGLYRGILPEYYKVVPGVGI FMTYETLK
Sbjct: 271 GRAVVYKTGLLGTLKRIVQTEGARGLYRGILPEYYKVVPGVGICFMTYETLK 322
Score = 55.1 bits (131), Expect = 9e-07
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = -3
Query: 605 SSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVGGRACVYNTGMCGAFQCIIKNEGV 426
S+ V L+G+ +++ +PLDLVR R+ + +Y +G+ + I +EG+
Sbjct: 139 SNLFVHFVAGGLAGITAASATYPLDLVRTRLAAQ----TKVIYYSGIWHTLRSITTDEGI 194
Query: 425 RGLYRGILPEYYKVVPGVGIAFMTYETLKRLLSST 321
GLY+G+ V P + I+F YE+L+ ST
Sbjct: 195 LGLYKGLGTTLVGVGPSIAISFSVYESLRSYWRST 229
>gb|AAM63657.1| Ca-dependent solute carrier-like protein [Arabidopsis thaliana]
Length = 330
Score = 171 bits (432), Expect = 1e-41
Identities = 85/112 (75%), Positives = 92/112 (81%)
Frame = -3
Query: 674 SIAISFSVYESLRSLWISRRPDDSSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVG 495
SIAISFSVYESLRS W S RP DS +VSLAC SLSG+ASST FPLDLVRR QLEG+G
Sbjct: 209 SIAISFSVYESLRSYWRSTRPHDSPIMVSLACGSLSGIASSTATFPLDLVRRTKQLEGIG 268
Query: 494 GRACVYNTGMCGAFQCIIKNEGVRGLYRGILPEYYKVVPGVGIAFMTYETLK 339
GRA VY TG+ G + I++ EG RGLYRGILPEYYKVVPGVGI FMTYETLK
Sbjct: 269 GRAVVYKTGLLGTLKRIVQTEGARGLYRGILPEYYKVVPGVGICFMTYETLK 320
Score = 55.1 bits (131), Expect = 9e-07
Identities = 29/95 (30%), Positives = 50/95 (52%)
Frame = -3
Query: 605 SSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVGGRACVYNTGMCGAFQCIIKNEGV 426
S+ V L+G+ +++ +PLDLVR R+ + +Y +G+ + I +EG+
Sbjct: 137 SNLFVHFVAGGLAGITAASATYPLDLVRTRLAAQ----TKVIYYSGIWHTLRSITTDEGI 192
Query: 425 RGLYRGILPEYYKVVPGVGIAFMTYETLKRLLSST 321
GLY+G+ V P + I+F YE+L+ ST
Sbjct: 193 LGLYKGLGTTLVGVGPSIAISFSVYESLRSYWRST 227
>gb|AAM91520.1| putative mitochondrial carrier protein [Arabidopsis thaliana]
gi|23197668|gb|AAN15361.1| putative mitochondrial
carrier protein [Arabidopsis thaliana]
Length = 337
Score = 162 bits (410), Expect = 4e-39
Identities = 77/119 (64%), Positives = 94/119 (78%)
Frame = -3
Query: 674 SIAISFSVYESLRSLWISRRPDDSSAVVSLACASLSGVASSTVIFPLDLVRRRMQLEGVG 495
S+AI+F+ YES++ W S RP+DS VVSL L+G SST +PLDLVRRRMQ+EG G
Sbjct: 218 SLAINFAAYESMKLFWHSHRPNDSDLVVSLVSGGLAGAVSSTATYPLDLVRRRMQVEGAG 277
Query: 494 GRACVYNTGMCGAFQCIIKNEGVRGLYRGILPEYYKVVPGVGIAFMTYETLKRLLSSTP 318
GRA VYNTG+ G F+ I K+EG +G+YRGILPEYYKVVPGVGI FMTY+ L+RLL+S P
Sbjct: 278 GRARVYNTGLFGTFKHIFKSEGFKGIYRGILPEYYKVVPGVGIVFMTYDALRRLLTSLP 336
Score = 58.5 bits (140), Expect = 8e-08
Identities = 35/118 (29%), Positives = 59/118 (49%), Gaps = 8/118 (6%)
Frame = -3
Query: 668 AISFSVYESLRSLWISRRP--------DDSSAVVSLACASLSGVASSTVIFPLDLVRRRM 513
A++F YE +L+ + P + +V L+G+ ++T +PLDLVR R+
Sbjct: 118 AVNFYAYEKY-NLFFNSNPVVQSFIGNTSGNPIVHFVSGGLAGITAATATYPLDLVRTRL 176
Query: 512 QLEGVGGRACVYNTGMCGAFQCIIKNEGVRGLYRGILPEYYKVVPGVGIAFMTYETLK 339
+ R +Y G+ F+ I + EG+ GLY+G+ V P + I F YE++K
Sbjct: 177 AAQ----RNAIYYQGIEHTFRTICREEGILGLYKGLGATLLGVGPSLAINFAAYESMK 230
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,345,981
Number of Sequences: 1393205
Number of extensions: 11926653
Number of successful extensions: 31392
Number of sequences better than 10.0: 838
Number of HSP's better than 10.0 without gapping: 28300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30778
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29704274460
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
