Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002128A_C01 KMC002128A_c01
(583 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_200324.1| molybdopterin synthase sulphurylase (gb|AAD1805... 186 2e-46
gb|AAD18052.1| molybdopterin synthase sulphurylase [Nicotiana pl... 184 5e-46
gb|AAH42324.1| Similar to molybdenum cofactor synthesis 3 [Danio... 100 2e-20
ref|XP_130596.1| RIKEN cDNA 1700020H17 [Mus musculus] 91 1e-17
gb|AAL90043.1| AT10573p [Drosophila melanogaster] 89 3e-17
>ref|NP_200324.1| molybdopterin synthase sulphurylase (gb|AAD18050.1); protein id:
At5g55130.1, supported by cDNA: gi_4337039 [Arabidopsis
thaliana] gi|22001817|sp|Q9ZNW0|MOC3_ARATH Molybdenum
cofactor synthesis protein 3 (Molybdopterin synthase
sulfurylase) (MPT synthase sulfurylase)
gi|4337040|gb|AAD18050.1| molybdopterin synthase
sulphurylase [Arabidopsis thaliana]
gi|4337042|gb|AAD18051.1| molybdopterin synthase
sulphurylase [Arabidopsis thaliana]
gi|9758110|dbj|BAB08582.1| molybdopterin synthase
sulphurylase [Arabidopsis thaliana]
Length = 464
Score = 186 bits (471), Expect = 2e-46
Identities = 92/144 (63%), Positives = 115/144 (78%), Gaps = 5/144 (3%)
Frame = -2
Query: 582 FDYEKFTQTPLCVPPLKVNILPAESRISSKEYEEVIHDKEPHVLVDVRPAHHFKIVSLPK 403
FDYE FTQ PL PL N+LPAESRISSKE++E++ KE HVL+DVRP+HH+KIVSLP
Sbjct: 323 FDYEDFTQFPLFAGPL--NLLPAESRISSKEFKEILQKKEQHVLLDVRPSHHYKIVSLPD 380
Query: 402 SLNIPLSNLEARLPEISSALKKE-----VSVGSSEAQLYVVCRRGNDSQRAVEYLHKMGF 238
SLNIPL+NLE RL E++SALK++ + + ++VVCRRGNDSQRAV+YL + GF
Sbjct: 381 SLNIPLANLETRLNELTSALKEKGNGHANTESCTNPSVFVVCRRGNDSQRAVQYLRESGF 440
Query: 237 TSAKDIVGGIESWAQNVDPNFPTY 166
SAKDI+GG+E+WA NV+PNFPTY
Sbjct: 441 DSAKDIIGGLEAWAANVNPNFPTY 464
>gb|AAD18052.1| molybdopterin synthase sulphurylase [Nicotiana plumbaginifolia]
Length = 401
Score = 184 bits (468), Expect = 5e-46
Identities = 93/143 (65%), Positives = 109/143 (76%), Gaps = 4/143 (2%)
Frame = -2
Query: 582 FDYEKFTQTPLCVPPLKVNILPAESRISSKEYEEVIHDKEPHVLVDVRPAHHFKIVSLPK 403
FDYEKFTQTPL PL++N+L ++RIS Y + + E HVLVDVRPAHH+KIVSLP
Sbjct: 262 FDYEKFTQTPLSTGPLRLNLLSQDARIS---YNDRVTKGEKHVLVDVRPAHHYKIVSLPN 318
Query: 402 SLNIPLSNLEARLPEISSALKKEVSV----GSSEAQLYVVCRRGNDSQRAVEYLHKMGFT 235
S+NIPLS LE RL EIS+AL+KE S A L+ +CRRGNDSQRAV+ LHK GFT
Sbjct: 319 SVNIPLSTLEGRLAEISAALEKEADKETFDSGSGASLHTICRRGNDSQRAVQLLHKAGFT 378
Query: 234 SAKDIVGGIESWAQNVDPNFPTY 166
SAKDI+GG+ESWA NVDP FPTY
Sbjct: 379 SAKDIIGGLESWAHNVDPKFPTY 401
>gb|AAH42324.1| Similar to molybdenum cofactor synthesis 3 [Danio rerio]
Length = 459
Score = 99.8 bits (247), Expect = 2e-20
Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 11/149 (7%)
Frame = -2
Query: 579 DYEKFTQTPLCVPPLKVNILPAESRISSKEYEEVIHDKEPHVLVDVRPAHHFKIVSLPKS 400
DYE F + ++++L E R+S ++Y+ ++ PH+L+DVRP I L S
Sbjct: 311 DYEHFCGSAATDKCRRLHLLSREQRVSVQDYKGILDHSTPHLLLDVRPKVEVDICRLSNS 370
Query: 399 LNIPLSNLEARLPEISSALKKEVS------VGSSEAQLYVVCRRGNDSQRAVEYLHKMG- 241
L+IPL++LE + PE + LK+ +S S Q++VVC+ GNDSQ+AV+ L KM
Sbjct: 371 LHIPLASLEDKKPEHITLLKEAISDLQEHLNNQSPVQVFVVCKLGNDSQKAVQLLEKMSG 430
Query: 240 ----FTSAKDIVGGIESWAQNVDPNFPTY 166
+ KDI GG+ +WA+ +D FP Y
Sbjct: 431 AEVEAMTVKDIGGGLMAWAKKIDYCFPQY 459
>ref|XP_130596.1| RIKEN cDNA 1700020H17 [Mus musculus]
Length = 249
Score = 90.5 bits (223), Expect = 1e-17
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Frame = -2
Query: 579 DYEKFTQTPLCVPPLKVNILPAESRISSKEYEEVIHDKEPHVLVDVRPAHHFKIVSLPKS 400
DYE F + + +L IS +Y+ ++ PHVL+DVRP I LP S
Sbjct: 100 DYEAFCGSSATDKCRALKLLCPRGAISVTDYKRLLDSGAPHVLLDVRPQVEVDICRLPHS 159
Query: 399 LNIPLSNLEARLPEISSALKKEVSVGSSEAQ------LYVVCRRGNDSQRAVEYLH---- 250
L+IPLS LE R + L + G E+Q +YV+C+ GNDSQ+AV+ L
Sbjct: 160 LHIPLSQLERRDADSLKLLGAALRKGKQESQEGVALPVYVICKLGNDSQKAVKVLQSLTA 219
Query: 249 --KMGFTSAKDIVGGIESWAQNVDPNFPTY 166
++ + +DIVGG+ +WA +D FP Y
Sbjct: 220 VPELDSLTVQDIVGGLMAWAAKIDGTFPQY 249
>gb|AAL90043.1| AT10573p [Drosophila melanogaster]
Length = 453
Score = 89.4 bits (220), Expect = 3e-17
Identities = 46/123 (37%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Frame = -2
Query: 525 ILPAESRISSKEYEEVIHDKEPHVLVDVRPAHHFKIVSLPKSLNIPLSNL--EARLPEIS 352
+L + R+S +EY++ I +PH+L+DVRP F+I LP+++N+PL + ++ L +
Sbjct: 338 LLSTDERLSVEEYQQKIQ-AQPHLLIDVRPTAEFEICQLPEAVNVPLVEILDDSYLKRLG 396
Query: 351 SALKKEVSVGSSEAQLYVVCRRGNDSQRAVEYLHKMGFTS-AKDIVGGIESWAQNVDPNF 175
L+ E + +VCRRGNDSQ AV++L T +D++GG+ +W +VDP+F
Sbjct: 397 KQLE------DKELPIVLVCRRGNDSQIAVQHLRNRFPTHFVRDLIGGLHAWTNSVDPSF 450
Query: 174 PTY 166
P Y
Sbjct: 451 PIY 453
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 509,300,138
Number of Sequences: 1393205
Number of extensions: 11392694
Number of successful extensions: 29776
Number of sequences better than 10.0: 290
Number of HSP's better than 10.0 without gapping: 28780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29604
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
