Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002111A_C03 KMC002111A_c03
(631 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37374.1|AF145348_1 peroxidase [Glycine max] 317 6e-86
pir||T06227 peroxidase (EC 1.11.1.7) 2, cationic - soybean gi|39... 309 2e-83
pir||T10790 peroxidase (EC 1.11.1.7) - upland cotton gi|167367|g... 298 5e-80
emb|CAB71128.2| cationic peroxidase [Cicer arietinum] 293 1e-78
dbj|BAB16317.1| secretory peroxidase [Avicennia marina] 278 3e-74
>gb|AAD37374.1|AF145348_1 peroxidase [Glycine max]
Length = 336
Score = 317 bits (813), Expect = 6e-86
Identities = 162/189 (85%), Positives = 173/189 (90%)
Frame = +3
Query: 54 PKLSSSFCLWLSLSALSLLSPSSAQEDVQDTGLAMNFYKETCPQAEDIITEQVKLLYKRH 233
PK + + + +SALSL SPS A E Q+ GL MNFYKE+CPQAEDIITEQVKLLYKRH
Sbjct: 3 PKGLTFLAVLICVSALSL-SPSVAGEG-QNNGLVMNFYKESCPQAEDIITEQVKLLYKRH 60
Query: 234 KNTAFSWLRNIFHDCAVQSCDASWLLDSTRKTLSEKETDRSFGLRNFRYIETIKEALERE 413
KNTAFSWLRNIFHDCAVQSCDAS LLDSTR++LSEKETDRSFGLRNFRYIETIKEALERE
Sbjct: 61 KNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERE 120
Query: 414 CPGVVSCSDILVLSARDGIAALGGPHIPLRTGRRDGRRSRADVVEQFLPDHNESISAVLD 593
CPGVVSC+DILVLSARDGI +LGGPHIPL+TGRRDGRRSRADVVEQFLPDHNESISAVLD
Sbjct: 121 CPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLD 180
Query: 594 KFGAMGIDT 620
KFGAMGIDT
Sbjct: 181 KFGAMGIDT 189
>pir||T06227 peroxidase (EC 1.11.1.7) 2, cationic - soybean
gi|3982596|gb|AAC83463.1| cationic peroxidase 2 [Glycine
max]
Length = 331
Score = 309 bits (791), Expect = 2e-83
Identities = 154/181 (85%), Positives = 165/181 (91%)
Frame = +3
Query: 78 LWLSLSALSLLSPSSAQEDVQDTGLAMNFYKETCPQAEDIITEQVKLLYKRHKNTAFSWL 257
++L++ S LS S +D GL MNFYKE+CPQAEDII EQVKLLYKRHKNTAFSWL
Sbjct: 7 IFLAVLCFSALSLSRCL--AEDNGLVMNFYKESCPQAEDIIKEQVKLLYKRHKNTAFSWL 64
Query: 258 RNIFHDCAVQSCDASWLLDSTRKTLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCS 437
RNIFHDCAVQSCDAS LLDSTR++LSEKETDRSFGLRNFRYIETIKEALERECPGVVSC+
Sbjct: 65 RNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCA 124
Query: 438 DILVLSARDGIAALGGPHIPLRTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGID 617
DILVLSARDGI +LGGPHIPL+TGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGID
Sbjct: 125 DILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGID 184
Query: 618 T 620
T
Sbjct: 185 T 185
>pir||T10790 peroxidase (EC 1.11.1.7) - upland cotton gi|167367|gb|AAA99868.1|
peroxidase
Length = 332
Score = 298 bits (762), Expect = 5e-80
Identities = 143/174 (82%), Positives = 161/174 (92%)
Frame = +3
Query: 99 LSLLSPSSAQEDVQDTGLAMNFYKETCPQAEDIITEQVKLLYKRHKNTAFSWLRNIFHDC 278
LS + S+ +D +D GL MNFYK++CPQAEDII EQVKLLYKRHKNTAFSWLRNIFHDC
Sbjct: 16 LSFSAVSAFAQDEEDQGLVMNFYKDSCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDC 75
Query: 279 AVQSCDASWLLDSTRKTLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCSDILVLSA 458
AVQSCDAS LLDSTR++LSEKETDRSFGLRNFRYIETIKEA+ERECPGVVSC+DILVLSA
Sbjct: 76 AVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSA 135
Query: 459 RDGIAALGGPHIPLRTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGIDT 620
R+GI +LGGP+IPL+TGRRDGRRSRADVVE++LPDHNE+IS VLD+F AMGIDT
Sbjct: 136 REGIVSLGGPYIPLKTGRRDGRRSRADVVEEYLPDHNETISGVLDRFAAMGIDT 189
>emb|CAB71128.2| cationic peroxidase [Cicer arietinum]
Length = 336
Score = 293 bits (750), Expect = 1e-78
Identities = 146/189 (77%), Positives = 165/189 (87%)
Frame = +3
Query: 54 PKLSSSFCLWLSLSALSLLSPSSAQEDVQDTGLAMNFYKETCPQAEDIITEQVKLLYKRH 233
P + F + LS S + SSAQ QD GL MN+YKE+CPQAE+II EQVKLLYKRH
Sbjct: 3 PNHAFIFLVLLSFSPQLFFTLSSAQ---QDNGLLMNYYKESCPQAEEIIKEQVKLLYKRH 59
Query: 234 KNTAFSWLRNIFHDCAVQSCDASWLLDSTRKTLSEKETDRSFGLRNFRYIETIKEALERE 413
KNTAFSWLRNIFHDCAVQSCDAS LL STR++LSE+E DRSFGLRNFRYI+TIKEA+ERE
Sbjct: 60 KNTAFSWLRNIFHDCAVQSCDASLLLTSTRRSLSEQEHDRSFGLRNFRYIDTIKEAVERE 119
Query: 414 CPGVVSCSDILVLSARDGIAALGGPHIPLRTGRRDGRRSRADVVEQFLPDHNESISAVLD 593
CPGVVSCSDILVLSARDGI +LGGP+IPL+TGRRDGR+SR D++E++LPDHNESISAVLD
Sbjct: 120 CPGVVSCSDILVLSARDGIVSLGGPYIPLKTGRRDGRKSRVDLLEEYLPDHNESISAVLD 179
Query: 594 KFGAMGIDT 620
KFGAMGIDT
Sbjct: 180 KFGAMGIDT 188
>dbj|BAB16317.1| secretory peroxidase [Avicennia marina]
Length = 331
Score = 278 bits (712), Expect = 3e-74
Identities = 136/186 (73%), Positives = 159/186 (85%)
Frame = +3
Query: 60 LSSSFCLWLSLSALSLLSPSSAQEDVQDTGLAMNFYKETCPQAEDIITEQVKLLYKRHKN 239
+ SS L A+ S SA + + GLAMN+Y+++CPQAE+II EQV+LLYKRHKN
Sbjct: 2 IMSSISKALFFFAILSFSSFSAFAENEGHGLAMNYYRDSCPQAEEIIKEQVQLLYKRHKN 61
Query: 240 TAFSWLRNIFHDCAVQSCDASWLLDSTRKTLSEKETDRSFGLRNFRYIETIKEALERECP 419
TAFSWLRNIFHDC V+SCDAS LLDSTR+ LSEKETDRSFG+RNFRYIETIKEALERECP
Sbjct: 62 TAFSWLRNIFHDCFVESCDASLLLDSTRRMLSEKETDRSFGMRNFRYIETIKEALERECP 121
Query: 420 GVVSCSDILVLSARDGIAALGGPHIPLRTGRRDGRRSRADVVEQFLPDHNESISAVLDKF 599
GVVSC+DILVLSARDGI +LGGP+IPL+TGRRDGR+SRA+++EQ LPDHNES+S VLD+F
Sbjct: 122 GVVSCADILVLSARDGIVSLGGPYIPLKTGRRDGRKSRAEILEQHLPDHNESLSVVLDRF 181
Query: 600 GAMGID 617
MGID
Sbjct: 182 ANMGID 187
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,256,522
Number of Sequences: 1393205
Number of extensions: 13428639
Number of successful extensions: 51412
Number of sequences better than 10.0: 472
Number of HSP's better than 10.0 without gapping: 48123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50933
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
