Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002057A_C04 KMC002057A_c04
(783 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T11576 type IIIa membrane protein cp-wap11 - cowpea gi|2218... 176 3e-43
ref|NP_186872.1| reversibly glycosylated polypeptide-1; protein ... 152 2e-41
emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tu... 146 6e-41
gb|AAC50000.1| reversibly glycosylated polypeptide-1 [Arabidopsi... 150 7e-41
emb|CAC83750.1| reversibly glycosylated polypeptide [Gossypium h... 144 7e-40
>pir||T11576 type IIIa membrane protein cp-wap11 - cowpea
gi|2218150|gb|AAB61671.1| type IIIa membrane protein
cp-wap11 [Vigna unguiculata]
Length = 322
Score = 176 bits (446), Expect = 3e-43
Identities = 82/93 (88%), Positives = 86/93 (92%)
Frame = -3
Query: 781 CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSAVLPKEATTVQKCY 602
CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQS VLPKEATTVQKCY
Sbjct: 159 CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSIVLPKEATTVQKCY 218
Query: 601 IELAKQVKEKLTKIDPYFDKLRRCHGHLD*SLG 503
I LAK VKEKL+K+DPYF ++ RCHGHLD LG
Sbjct: 219 IVLAKLVKEKLSKVDPYFGQVGRCHGHLDLKLG 251
>ref|NP_186872.1| reversibly glycosylated polypeptide-1; protein id: At3g02230.1,
supported by cDNA: gi_2317728 [Arabidopsis thaliana]
gi|6041795|gb|AAF02115.1|AC009755_8 reversibly
glycosylated polypeptide-1 [Arabidopsis thaliana]
gi|27311607|gb|AAO00769.1| reversibly glycosylated
polypeptide-1 [Arabidopsis thaliana]
Length = 357
Score = 152 bits (384), Expect(2) = 2e-41
Identities = 70/81 (86%), Positives = 76/81 (93%)
Frame = -3
Query: 781 CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSAVLPKEATTVQKCY 602
CDHLGLG+KTGLPYIYHSKASNPFVNL+KEYKGIFWQEDIIPFFQSA L KEA TVQ+CY
Sbjct: 257 CDHLGLGVKTGLPYIYHSKASNPFVNLKKEYKGIFWQEDIIPFFQSAKLTKEAVTVQQCY 316
Query: 601 IELAKQVKEKLTKIDPYFDKL 539
+EL+K VKEKL+ IDPYFDKL
Sbjct: 317 MELSKLVKEKLSPIDPYFDKL 337
Score = 39.7 bits (91), Expect(2) = 2e-41
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 537 ADAMVTWIEAWDELNP 490
ADAMVTWIEAWDELNP
Sbjct: 338 ADAMVTWIEAWDELNP 353
>emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tuberosum]
Length = 366
Score = 146 bits (369), Expect(2) = 6e-41
Identities = 65/81 (80%), Positives = 76/81 (93%)
Frame = -3
Query: 781 CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSAVLPKEATTVQKCY 602
CDHLGLG+KTGLPYI+HSKASNPFVNL+KEYKGI+WQE+IIPF QSA LPK+ T+VQ+CY
Sbjct: 251 CDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPKDCTSVQQCY 310
Query: 601 IELAKQVKEKLTKIDPYFDKL 539
+EL+KQVKEKL+ IDPYF KL
Sbjct: 311 LELSKQVKEKLSTIDPYFTKL 331
Score = 43.5 bits (101), Expect(2) = 6e-41
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1
Query: 546 TSCADAMVTWIEAWDELNPAG 484
T ADAMVTWIEAWDELNP G
Sbjct: 329 TKLADAMVTWIEAWDELNPTG 349
>gb|AAC50000.1| reversibly glycosylated polypeptide-1 [Arabidopsis thaliana]
Length = 357
Score = 150 bits (379), Expect(2) = 7e-41
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = -3
Query: 781 CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSAVLPKEATTVQKCY 602
CDHLGLG+KTGLPYIYHSKASNPFVNL+KEYKGIFWQEDIIPFFQS L KEA TVQ+CY
Sbjct: 257 CDHLGLGVKTGLPYIYHSKASNPFVNLKKEYKGIFWQEDIIPFFQSPKLTKEAVTVQQCY 316
Query: 601 IELAKQVKEKLTKIDPYFDKL 539
+EL+K VKEKL+ IDPYFDKL
Sbjct: 317 MELSKLVKEKLSPIDPYFDKL 337
Score = 39.7 bits (91), Expect(2) = 7e-41
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 537 ADAMVTWIEAWDELNP 490
ADAMVTWIEAWDELNP
Sbjct: 338 ADAMVTWIEAWDELNP 353
>emb|CAC83750.1| reversibly glycosylated polypeptide [Gossypium hirsutum]
Length = 359
Score = 144 bits (363), Expect(2) = 7e-40
Identities = 63/81 (77%), Positives = 74/81 (90%)
Frame = -3
Query: 781 CDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSAVLPKEATTVQKCY 602
CDHLG G+KTGLPYI+HSKASNPFVNL+KEYKGI+WQE++IPFFQS LPK+ TTVQKCY
Sbjct: 249 CDHLGWGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVALPKDCTTVQKCY 308
Query: 601 IELAKQVKEKLTKIDPYFDKL 539
IE++KQVK KL K+D YF+KL
Sbjct: 309 IEISKQVKAKLGKVDDYFNKL 329
Score = 42.4 bits (98), Expect(2) = 7e-40
Identities = 17/18 (94%), Positives = 18/18 (99%)
Frame = -1
Query: 537 ADAMVTWIEAWDELNPAG 484
ADAMVTWIEAWDELNP+G
Sbjct: 330 ADAMVTWIEAWDELNPSG 347
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 649,004,308
Number of Sequences: 1393205
Number of extensions: 13500295
Number of successful extensions: 34760
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34750
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 38935490438
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
