Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002043A_C01 KMC002043A_c01
(689 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_199533.1| ethylene responsive element binding factor 2 (E... 108 5e-23
gb|AAM64544.1| ethylene responsive element binding factor 2 (ATE... 106 3e-22
gb|AAF63205.1|AF245119_1 AP2-related transcription factor [Mesem... 103 2e-21
pir||T51988 ethylene responsive element binding factor 1 [import... 99 7e-20
sp|O80337|ERFI_ARATH Ethylene responsive element binding factor ... 99 7e-20
>ref|NP_199533.1| ethylene responsive element binding factor 2 (EREBP-2); protein id:
At5g47220.1, supported by cDNA: 3012., supported by
cDNA: gi_3434968 [Arabidopsis thaliana]
gi|7531108|sp|O80338|ERF2_ARATH Ethylene responsive
element binding factor 2 (AtERF2)
gi|25350259|pir||T51989 ethylene responsive element
binding factor 2 [imported] - Arabidopsis thaliana
gi|3434969|dbj|BAA32419.1| ethylene responsive element
binding factor 2 [Arabidopsis thaliana]
gi|8809604|dbj|BAA97155.1| ethylene responsive element
binding factor 2 (ATERF2) [Arabidopsis thaliana]
Length = 243
Score = 108 bits (271), Expect = 5e-23
Identities = 59/79 (74%), Positives = 63/79 (79%)
Frame = -2
Query: 688 FETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVPSKRSLSSSSSCSSSSSSE 509
FETAEDAALAYD AA+RMRGSRALLNFPLRVNSGEPDPVR+ SKRS SSSSS SSS+SS
Sbjct: 147 FETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSS 206
Query: 508 SGLTAKRRKKVVGPTVPVV 452
KRR+K T VV
Sbjct: 207 ENGKLKRRRKAENLTSEVV 225
>gb|AAM64544.1| ethylene responsive element binding factor 2 (ATERF2) [Arabidopsis
thaliana]
Length = 243
Score = 106 bits (265), Expect = 3e-22
Identities = 58/79 (73%), Positives = 62/79 (78%)
Frame = -2
Query: 688 FETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVPSKRSLSSSSSCSSSSSSE 509
FETAEDAALAYD AA+RMRGS ALLNFPLRVNSGEPDPVR+ SKRS SSSSS SSS+SS
Sbjct: 147 FETAEDAALAYDIAAFRMRGSSALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSS 206
Query: 508 SGLTAKRRKKVVGPTVPVV 452
KRR+K T VV
Sbjct: 207 ENGKLKRRRKAENLTSEVV 225
>gb|AAF63205.1|AF245119_1 AP2-related transcription factor [Mesembryanthemum crystallinum]
Length = 282
Score = 103 bits (258), Expect = 2e-21
Identities = 54/74 (72%), Positives = 59/74 (78%)
Frame = -2
Query: 688 FETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVPSKRSLSSSSSCSSSSSSE 509
FETAEDAALAYDRAA+RMRGS+ALLNFPLRVNSGEPDPVR+ SKRS S SSSS S
Sbjct: 168 FETAEDAALAYDRAAFRMRGSKALLNFPLRVNSGEPDPVRITSKRSSPERSVSSSSSESA 227
Query: 508 SGLTAKRRKKVVGP 467
S K+ + VVGP
Sbjct: 228 SPKRRKKEEVVVGP 241
>pir||T51988 ethylene responsive element binding factor 1 [imported] -
Arabidopsis thaliana gi|3434967|dbj|BAA32418.1| ethylene
responsive element binding factor 1 [Arabidopsis
thaliana]
Length = 266
Score = 98.6 bits (244), Expect = 7e-20
Identities = 53/73 (72%), Positives = 57/73 (77%)
Frame = -2
Query: 688 FETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVPSKRSLSSSSSCSSSSSSE 509
FETAEDAALAYDRAA+RMRGSRALLNFPLRVNSGEPDPVR+ SKRS S SSS+E
Sbjct: 176 FETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRS-------SFSSSNE 228
Query: 508 SGLTAKRRKKVVG 470
+G KRR G
Sbjct: 229 NGAPKKRRTVAAG 241
>sp|O80337|ERFI_ARATH Ethylene responsive element binding factor 1 (AtERF1) (EREBP-2
protein) gi|16648795|gb|AAL25588.1| AT4g17500/dl4785w
[Arabidopsis thaliana] gi|17064914|gb|AAL32611.1|
Unknown protein [Arabidopsis thaliana]
gi|27311945|gb|AAO00938.1| Unknown protein [Arabidopsis
thaliana]
Length = 268
Score = 98.6 bits (244), Expect = 7e-20
Identities = 53/73 (72%), Positives = 57/73 (77%)
Frame = -2
Query: 688 FETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVPSKRSLSSSSSCSSSSSSE 509
FETAEDAALAYDRAA+RMRGSRALLNFPLRVNSGEPDPVR+ SKRS S SSS+E
Sbjct: 178 FETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRS-------SFSSSNE 230
Query: 508 SGLTAKRRKKVVG 470
+G KRR G
Sbjct: 231 NGAPKKRRTVAAG 243
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 639,464,348
Number of Sequences: 1393205
Number of extensions: 15302641
Number of successful extensions: 144849
Number of sequences better than 10.0: 498
Number of HSP's better than 10.0 without gapping: 73176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118198
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31118763720
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
