Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002039A_C01 KMC002039A_c01
(796 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567347.1| neutral invertase like protein; protein id: At4... 314 8e-85
pir||A85097 neutral invertase like protein [imported] - Arabidop... 314 8e-85
ref|NP_195212.1| invertase - like protein; protein id: At4g34860... 311 5e-84
ref|NP_564177.1| putative invertase; protein id: At1g22650.1, su... 310 2e-83
gb|AAM65926.1| putative invertase [Arabidopsis thaliana] 307 1e-82
>ref|NP_567347.1| neutral invertase like protein; protein id: At4g09510.1, supported
by cDNA: 156092. [Arabidopsis thaliana]
Length = 558
Score = 314 bits (805), Expect = 8e-85
Identities = 147/163 (90%), Positives = 155/163 (94%)
Frame = -3
Query: 794 ILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHN 615
ILSSLATP+QSMAIMDL+E RW+ELVGEMPLKI YP IESHEWRIVTGCDPKNTRWSYHN
Sbjct: 396 ILSSLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCIESHEWRIVTGCDPKNTRWSYHN 455
Query: 614 GGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQ 435
GGSWPVLLW +TAACIKTGRPQIARRAI+L ESRL +D WPEYYDGK GRYVGKQARKYQ
Sbjct: 456 GGSWPVLLWTLTAACIKTGRPQIARRAIDLIESRLHRDCWPEYYDGKQGRYVGKQARKYQ 515
Query: 434 TWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWTC 306
TWSIAGYLVAKMMLEDPSH+GMISLEEDKQMKPVIKRS+SWTC
Sbjct: 516 TWSIAGYLVAKMMLEDPSHIGMISLEEDKQMKPVIKRSASWTC 558
>pir||A85097 neutral invertase like protein [imported] - Arabidopsis thaliana
gi|7267646|emb|CAB78074.1| neutral invertase like
protein [Arabidopsis thaliana]
Length = 566
Score = 314 bits (805), Expect = 8e-85
Identities = 147/163 (90%), Positives = 155/163 (94%)
Frame = -3
Query: 794 ILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHN 615
ILSSLATP+QSMAIMDL+E RW+ELVGEMPLKI YP IESHEWRIVTGCDPKNTRWSYHN
Sbjct: 404 ILSSLATPDQSMAIMDLLEHRWEELVGEMPLKICYPCIESHEWRIVTGCDPKNTRWSYHN 463
Query: 614 GGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQ 435
GGSWPVLLW +TAACIKTGRPQIARRAI+L ESRL +D WPEYYDGK GRYVGKQARKYQ
Sbjct: 464 GGSWPVLLWTLTAACIKTGRPQIARRAIDLIESRLHRDCWPEYYDGKQGRYVGKQARKYQ 523
Query: 434 TWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWTC 306
TWSIAGYLVAKMMLEDPSH+GMISLEEDKQMKPVIKRS+SWTC
Sbjct: 524 TWSIAGYLVAKMMLEDPSHIGMISLEEDKQMKPVIKRSASWTC 566
>ref|NP_195212.1| invertase - like protein; protein id: At4g34860.1, supported by
cDNA: gi_15215775 [Arabidopsis thaliana]
gi|7486858|pir||T10232 hypothetical protein T11I11.100 -
Arabidopsis thaliana gi|5123703|emb|CAB45447.1|
invertase-like protein [Arabidopsis thaliana]
gi|7270437|emb|CAB80203.1| invertase-like protein
[Arabidopsis thaliana] gi|15215776|gb|AAK91433.1|
AT4g34860/F11I11_100 [Arabidopsis thaliana]
gi|27363384|gb|AAO11611.1| At4g34860/F11I11_100
[Arabidopsis thaliana]
Length = 571
Score = 311 bits (798), Expect = 5e-84
Identities = 143/163 (87%), Positives = 157/163 (95%)
Frame = -3
Query: 794 ILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHN 615
ILSSLATPEQS AIMDLIE+RW+ELVGEMPLK+ YPAIESHEWRIVTGCDPKNTRWSYHN
Sbjct: 409 ILSSLATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHN 468
Query: 614 GGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQ 435
GGSWPVLLWL+TAACIKTGRPQIARRAIE+AE+RL KD WPEYYDGK+GRYVGKQ+RK Q
Sbjct: 469 GGSWPVLLWLLTAACIKTGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYVGKQSRKNQ 528
Query: 434 TWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWTC 306
TWS+AGYLVAKMMLEDPSH+GM+ LEEDKQMKPV++RS+SWTC
Sbjct: 529 TWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRRSNSWTC 571
>ref|NP_564177.1| putative invertase; protein id: At1g22650.1, supported by cDNA:
6399. [Arabidopsis thaliana]
Length = 534
Score = 310 bits (793), Expect = 2e-83
Identities = 144/162 (88%), Positives = 156/162 (95%)
Frame = -3
Query: 794 ILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHN 615
IL+SLATPEQS +IMDLIE RW+ELVGEMP+KI +PAIESHEWRIVTGCDPKNTRWSYHN
Sbjct: 373 ILASLATPEQSASIMDLIEERWEELVGEMPVKICHPAIESHEWRIVTGCDPKNTRWSYHN 432
Query: 614 GGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQ 435
GGSWPVLLWL+TAACIKTGRPQIARRAI+LAE+RLLKDGWPEYYDGK GR++GKQARK+Q
Sbjct: 433 GGSWPVLLWLLTAACIKTGRPQIARRAIDLAEARLLKDGWPEYYDGKSGRFIGKQARKFQ 492
Query: 434 TWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWT 309
TWSIAGYLVAKM+LEDPSHLGMISLEEDKQ KPVIKRS SWT
Sbjct: 493 TWSIAGYLVAKMLLEDPSHLGMISLEEDKQTKPVIKRSYSWT 534
>gb|AAM65926.1| putative invertase [Arabidopsis thaliana]
Length = 534
Score = 307 bits (787), Expect = 1e-82
Identities = 143/162 (88%), Positives = 155/162 (95%)
Frame = -3
Query: 794 ILSSLATPEQSMAIMDLIEARWDELVGEMPLKISYPAIESHEWRIVTGCDPKNTRWSYHN 615
IL+SLATPEQS +IMDLIE RW+ELVG MP+KI +PAIESHEWRIVTGCDPKNTRWSYHN
Sbjct: 373 ILASLATPEQSASIMDLIEERWEELVGAMPVKICHPAIESHEWRIVTGCDPKNTRWSYHN 432
Query: 614 GGSWPVLLWLVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQ 435
GGSWPVLLWL+TAACIKTGRPQIARRAI+LAE+RLLKDGWPEYYDGK GR++GKQARK+Q
Sbjct: 433 GGSWPVLLWLLTAACIKTGRPQIARRAIDLAEARLLKDGWPEYYDGKSGRFIGKQARKFQ 492
Query: 434 TWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIKRSSSWT 309
TWSIAGYLVAKM+LEDPSHLGMISLEEDKQ KPVIKRS SWT
Sbjct: 493 TWSIAGYLVAKMLLEDPSHLGMISLEEDKQTKPVIKRSYSWT 534
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 683,582,531
Number of Sequences: 1393205
Number of extensions: 15137029
Number of successful extensions: 40844
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 39408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40804
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40055936206
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
