Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002025A_C01 KMC002025A_c01
(670 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SM60|PGMU_PEA Phosphoglucomutase, cytoplasmic (Glucose phos... 158 7e-38
ref|NP_173732.1| putative phosphoglucomutase; protein id: At1g23... 145 5e-34
sp|Q9M4G4|PGMU_SOLTU Phosphoglucomutase, cytoplasmic (Glucose ph... 145 5e-34
gb|AAF86992.1|AC005292_1 F26F24.1 [Arabidopsis thaliana] 145 5e-34
emb|CAB43705.2| cytosolic phosphoglucomutase [Arabidopsis thaliana] 145 5e-34
>sp|Q9SM60|PGMU_PEA Phosphoglucomutase, cytoplasmic (Glucose phosphomutase) (PGM)
gi|6272281|emb|CAB60127.1| cytosolic phosphoglucomutase
[Pisum sativum]
Length = 582
Score = 158 bits (399), Expect = 7e-38
Identities = 79/85 (92%), Positives = 81/85 (94%)
Frame = -2
Query: 666 DPVDGSISSHQGIRYFFEDGSRLIFRLSGTGSVGATIRLYLDPYEKDPSKIGRLSHEALA 487
DPVDGSISSHQGIRY FEDGSRLIFRLSGTGS GATIRLY++ YEKDPSKIGRLSHEALA
Sbjct: 498 DPVDGSISSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKIGRLSHEALA 557
Query: 486 PLVEVALKLSKMEEFTGRSAPTVIT 412
PLVE ALKLSKMEEFTGRSAPTVIT
Sbjct: 558 PLVEAALKLSKMEEFTGRSAPTVIT 582
>ref|NP_173732.1| putative phosphoglucomutase; protein id: At1g23190.1, supported by
cDNA: gi_16649112, supported by cDNA: gi_20148520
[Arabidopsis thaliana] gi|16649113|gb|AAL24408.1|
phosphoglucomutase [Arabidopsis thaliana]
gi|20148521|gb|AAM10151.1| phosphoglucomutase
[Arabidopsis thaliana]
Length = 583
Score = 145 bits (366), Expect = 5e-34
Identities = 72/86 (83%), Positives = 78/86 (89%)
Frame = -2
Query: 669 KDPVDGSISSHQGIRYFFEDGSRLIFRLSGTGSVGATIRLYLDPYEKDPSKIGRLSHEAL 490
KDPVDGSIS HQGIRY FEDGSRL+FRLSGTGS GATIRLY++ YEKD SK GR S EAL
Sbjct: 498 KDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKTGRESQEAL 557
Query: 489 APLVEVALKLSKMEEFTGRSAPTVIT 412
+PLV++ALKLSKMEEFTGRSAPTVIT
Sbjct: 558 SPLVDLALKLSKMEEFTGRSAPTVIT 583
>sp|Q9M4G4|PGMU_SOLTU Phosphoglucomutase, cytoplasmic (Glucose phosphomutase) (PGM)
gi|8250624|emb|CAB93681.1| cytosolic phosphoglucomutase
[Solanum tuberosum]
Length = 583
Score = 145 bits (366), Expect = 5e-34
Identities = 72/86 (83%), Positives = 78/86 (89%)
Frame = -2
Query: 669 KDPVDGSISSHQGIRYFFEDGSRLIFRLSGTGSVGATIRLYLDPYEKDPSKIGRLSHEAL 490
KDPVDGS+S HQGIRY FEDGSRL+FRLSGTGS GATIRLY++ YEKD SKIGR S EAL
Sbjct: 498 KDPVDGSVSKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDSSKIGRDSQEAL 557
Query: 489 APLVEVALKLSKMEEFTGRSAPTVIT 412
APLVEVALKLSKM+E+T RSAPTVIT
Sbjct: 558 APLVEVALKLSKMQEYTSRSAPTVIT 583
>gb|AAF86992.1|AC005292_1 F26F24.1 [Arabidopsis thaliana]
Length = 102
Score = 145 bits (366), Expect = 5e-34
Identities = 72/86 (83%), Positives = 78/86 (89%)
Frame = -2
Query: 669 KDPVDGSISSHQGIRYFFEDGSRLIFRLSGTGSVGATIRLYLDPYEKDPSKIGRLSHEAL 490
KDPVDGSIS HQGIRY FEDGSRL+FRLSGTGS GATIRLY++ YEKD SK GR S EAL
Sbjct: 17 KDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKTGRESQEAL 76
Query: 489 APLVEVALKLSKMEEFTGRSAPTVIT 412
+PLV++ALKLSKMEEFTGRSAPTVIT
Sbjct: 77 SPLVDLALKLSKMEEFTGRSAPTVIT 102
>emb|CAB43705.2| cytosolic phosphoglucomutase [Arabidopsis thaliana]
Length = 513
Score = 145 bits (366), Expect = 5e-34
Identities = 72/86 (83%), Positives = 78/86 (89%)
Frame = -2
Query: 669 KDPVDGSISSHQGIRYFFEDGSRLIFRLSGTGSVGATIRLYLDPYEKDPSKIGRLSHEAL 490
KDPVDGSIS HQGIRY FEDGSRL+FRLSGTGS GATIRLY++ YEKD SK GR S EAL
Sbjct: 428 KDPVDGSISKHQGIRYLFEDGSRLVFRLSGTGSEGATIRLYIEQYEKDASKTGRESQEAL 487
Query: 489 APLVEVALKLSKMEEFTGRSAPTVIT 412
+PLV++ALKLSKMEEFTGRSAPTVIT
Sbjct: 488 SPLVDLALKLSKMEEFTGRSAPTVIT 513
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 621,956,332
Number of Sequences: 1393205
Number of extensions: 13973194
Number of successful extensions: 41306
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 37512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40769
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 29138478756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
