Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002023A_C01 KMC002023A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193325.1| PRL1 protein; protein id: At4g15900.1, supporte... 152 3e-36
gb|AAM61532.1| PRL1 protein [Arabidopsis thaliana] 152 3e-36
gb|AAO22800.1| putative PRL1 protein [Arabidopsis thaliana] 152 3e-36
dbj|BAB02756.1| PP1/PP2A phosphatases pleiotropic regulator PRL2... 150 1e-35
gb|AAL06842.1| AT3g16650/MGL6_10 [Arabidopsis thaliana] 150 1e-35
>ref|NP_193325.1| PRL1 protein; protein id: At4g15900.1, supported by cDNA: 123113.
[Arabidopsis thaliana] gi|3122638|sp|Q42384|PRL1_ARATH
PP1/PP2A phosphatases pleiotropic regulator PRL1
gi|1076381|pir||S49820 PRL1 protein - Arabidopsis
thaliana gi|577733|emb|CAA58031.1| PRL1 [Arabidopsis
thaliana] gi|577735|emb|CAA58032.1| PRL1 [Arabidopsis
thaliana] gi|2244947|emb|CAB10369.1| PRL1 protein
[Arabidopsis thaliana] gi|7268338|emb|CAB78632.1| PRL1
protein [Arabidopsis thaliana]
Length = 486
Score = 152 bits (384), Expect = 3e-36
Identities = 65/79 (82%), Positives = 76/79 (95%)
Frame = -1
Query: 602 SMWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALTYDVTGSRLISCEADKTIKVWKEDEN 423
S+WFWDWKSGH+FQQ++TIVQPGSL+SEAGIYA YD TGSRL++CEADKTIK+WKEDEN
Sbjct: 408 SIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDEN 467
Query: 422 ATPETHPLNFRPPKDIRRF 366
ATPETHP+NF+PPK+IRRF
Sbjct: 468 ATPETHPINFKPPKEIRRF 486
>gb|AAM61532.1| PRL1 protein [Arabidopsis thaliana]
Length = 486
Score = 152 bits (384), Expect = 3e-36
Identities = 65/79 (82%), Positives = 76/79 (95%)
Frame = -1
Query: 602 SMWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALTYDVTGSRLISCEADKTIKVWKEDEN 423
S+WFWDWKSGH+FQQ++TIVQPGSL+SEAGIYA YD TGSRL++CEADKTIK+WKEDEN
Sbjct: 408 SIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDEN 467
Query: 422 ATPETHPLNFRPPKDIRRF 366
ATPETHP+NF+PPK+IRRF
Sbjct: 468 ATPETHPINFKPPKEIRRF 486
>gb|AAO22800.1| putative PRL1 protein [Arabidopsis thaliana]
Length = 486
Score = 152 bits (384), Expect = 3e-36
Identities = 65/79 (82%), Positives = 76/79 (95%)
Frame = -1
Query: 602 SMWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALTYDVTGSRLISCEADKTIKVWKEDEN 423
S+WFWDWKSGH+FQQ++TIVQPGSL+SEAGIYA YD TGSRL++CEADKTIK+WKEDEN
Sbjct: 408 SIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMWKEDEN 467
Query: 422 ATPETHPLNFRPPKDIRRF 366
ATPETHP+NF+PPK+IRRF
Sbjct: 468 ATPETHPINFKPPKEIRRF 486
>dbj|BAB02756.1| PP1/PP2A phosphatases pleiotropic regulator PRL2 [Arabidopsis
thaliana]
Length = 476
Score = 150 bits (379), Expect = 1e-35
Identities = 64/78 (82%), Positives = 74/78 (94%)
Frame = -1
Query: 599 MWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALTYDVTGSRLISCEADKTIKVWKEDENA 420
+WFWDWKSGHNFQ+A+TIVQPGSL+SEAGIYA YD TGSRL++CE DKTIK+WKEDE+A
Sbjct: 399 LWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDA 458
Query: 419 TPETHPLNFRPPKDIRRF 366
TPETHPLNF+PPK+IRRF
Sbjct: 459 TPETHPLNFKPPKEIRRF 476
>gb|AAL06842.1| AT3g16650/MGL6_10 [Arabidopsis thaliana]
Length = 477
Score = 150 bits (379), Expect = 1e-35
Identities = 64/78 (82%), Positives = 74/78 (94%)
Frame = -1
Query: 599 MWFWDWKSGHNFQQAQTIVQPGSLDSEAGIYALTYDVTGSRLISCEADKTIKVWKEDENA 420
+WFWDWKSGHNFQ+A+TIVQPGSL+SEAGIYA YD TGSRL++CE DKTIK+WKEDE+A
Sbjct: 400 LWFWDWKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMWKEDEDA 459
Query: 419 TPETHPLNFRPPKDIRRF 366
TPETHPLNF+PPK+IRRF
Sbjct: 460 TPETHPLNFKPPKEIRRF 477
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,576,511
Number of Sequences: 1393205
Number of extensions: 9370394
Number of successful extensions: 23982
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 21990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23966
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
