Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002010A_C01 KMC002010A_c01
(681 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09640 protein phosphatase 2C - alfalfa gi|2582800|emb|CAA7... 239 2e-62
ref|NP_180563.1| protein phosphatase 2C (PP2C); protein id: At2g... 202 3e-51
ref|NP_172196.1| protein phosphatase 2C (PP2C); protein id: At1g... 196 2e-49
ref|NP_181547.1| protein phosphatase 2C (PP2C); protein id: At2g... 190 2e-47
gb|AAO42063.1| putative protein phosphatase 2C (PP2C) [Arabidops... 190 2e-47
>pir||T09640 protein phosphatase 2C - alfalfa gi|2582800|emb|CAA72341.1| protein
phosphatase 2C [Medicago sativa]
Length = 381
Score = 239 bits (611), Expect = 2e-62
Identities = 113/134 (84%), Positives = 124/134 (92%)
Frame = -2
Query: 680 EALTTDHRPSREDERERIETLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETK 501
EALT+DHRPSREDE++RIETLGGYVDLCRGVWRIQGSLAVSR IGDRHLKQWVTAEPETK
Sbjct: 248 EALTSDHRPSREDEKDRIETLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETK 307
Query: 500 VIKIEPEHDLLILASDGLWDKVSNQEAVDLARPLCVGNNKPQSLLACKKLVDLACSRGSM 321
VI+IEPEHDLLILASDGLWDKVSNQEAVD+AR CVGNN Q L+ACKKL L+ SRGS+
Sbjct: 308 VIRIEPEHDLLILASDGLWDKVSNQEAVDIARQFCVGNNNQQPLMACKKLAQLSVSRGSL 367
Query: 320 DDTSVMLIKLEHYI 279
DDTSVM+IK +HY+
Sbjct: 368 DDTSVMIIKFKHYV 381
>ref|NP_180563.1| protein phosphatase 2C (PP2C); protein id: At2g30020.1, supported
by cDNA: gi_13877670 [Arabidopsis thaliana]
gi|7486043|pir||T02483 probable protein phosphatase 2C
At2g30020 [imported] - Arabidopsis thaliana
gi|3420049|gb|AAC31850.1| putative protein phosphatase
2C [Arabidopsis thaliana]
gi|13877671|gb|AAK43913.1|AF370594_1 putative protein
phosphatase 2C [Arabidopsis thaliana]
Length = 396
Score = 202 bits (514), Expect = 3e-51
Identities = 98/134 (73%), Positives = 112/134 (83%)
Frame = -2
Query: 680 EALTTDHRPSREDERERIETLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETK 501
+AL++DHRPSR+DER+RIET GGYVD GVWRIQGSLAVSR IGD LK+WV AEPETK
Sbjct: 263 KALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETK 322
Query: 500 VIKIEPEHDLLILASDGLWDKVSNQEAVDLARPLCVGNNKPQSLLACKKLVDLACSRGSM 321
+ +IE +H+ LILASDGLWDKVSNQEAVD+ARPLC+G KP L ACKKLVDL+ SRGS
Sbjct: 323 ISRIEHDHEFLILASDGLWDKVSNQEAVDIARPLCLGTEKPLLLAACKKLVDLSASRGSS 382
Query: 320 DDTSVMLIKLEHYI 279
DD SVMLI L +I
Sbjct: 383 DDISVMLIPLRQFI 396
>ref|NP_172196.1| protein phosphatase 2C (PP2C); protein id: At1g07160.1, supported
by cDNA: gi_20258779 [Arabidopsis thaliana]
gi|20258780|gb|AAM13912.1| putative protein phosphatase
2C [Arabidopsis thaliana]
Length = 380
Score = 196 bits (498), Expect = 2e-49
Identities = 95/133 (71%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Frame = -2
Query: 680 EALTTDHRPSREDERERIETLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETK 501
EALT+DHRPSR+DER RIE+ GGYVD VWRIQGSLAVSR IGD HLKQW+ +EPE
Sbjct: 246 EALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEIN 305
Query: 500 VIKIEPEHDLLILASDGLWDKVSNQEAVDLARPLCVG-NNKPQSLLACKKLVDLACSRGS 324
+++I P+H+ LILASDGLWDKVSNQEAVD+ARP C G + K + LLACKKLVDL+ SRGS
Sbjct: 306 ILRINPQHEFLILASDGLWDKVSNQEAVDIARPFCKGTDQKRKPLLACKKLVDLSVSRGS 365
Query: 323 MDDTSVMLIKLEH 285
+DD SVMLI+L H
Sbjct: 366 LDDISVMLIQLCH 378
>ref|NP_181547.1| protein phosphatase 2C (PP2C); protein id: At2g40180.1 [Arabidopsis
thaliana] gi|25352216|pir||C84826 protein phosphatase 2C
(AthPP2C5) [imported] - Arabidopsis thaliana
gi|4587992|gb|AAD25933.1|AF085279_6 protein phosphatase
2C [Arabidopsis thaliana]
Length = 390
Score = 190 bits (482), Expect = 2e-47
Identities = 86/134 (64%), Positives = 112/134 (83%)
Frame = -2
Query: 680 EALTTDHRPSREDERERIETLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETK 501
EALT+DH PS+ +E +RIE LGGYVD C GVWRIQG+LAVSR IGDR+LK+WV AEPET+
Sbjct: 256 EALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETR 315
Query: 500 VIKIEPEHDLLILASDGLWDKVSNQEAVDLARPLCVGNNKPQSLLACKKLVDLACSRGSM 321
++I+PE + LILASDGLWDKV+NQEAVD+ RP CVG P +L ACKKL +L+ RGS+
Sbjct: 316 TLRIKPEFEFLILASDGLWDKVTNQEAVDVVRPYCVGVENPMTLSACKKLAELSVKRGSL 375
Query: 320 DDTSVMLIKLEHYI 279
DD S+++I+L++++
Sbjct: 376 DDISLIIIQLQNFL 389
>gb|AAO42063.1| putative protein phosphatase 2C (PP2C) [Arabidopsis thaliana]
gi|28827530|gb|AAO50609.1| putative protein phosphatase
2C (PP2C) [Arabidopsis thaliana]
Length = 190
Score = 190 bits (482), Expect = 2e-47
Identities = 86/134 (64%), Positives = 112/134 (83%)
Frame = -2
Query: 680 EALTTDHRPSREDERERIETLGGYVDLCRGVWRIQGSLAVSRSIGDRHLKQWVTAEPETK 501
EALT+DH PS+ +E +RIE LGGYVD C GVWRIQG+LAVSR IGDR+LK+WV AEPET+
Sbjct: 56 EALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETR 115
Query: 500 VIKIEPEHDLLILASDGLWDKVSNQEAVDLARPLCVGNNKPQSLLACKKLVDLACSRGSM 321
++I+PE + LILASDGLWDKV+NQEAVD+ RP CVG P +L ACKKL +L+ RGS+
Sbjct: 116 TLRIKPEFEFLILASDGLWDKVTNQEAVDVVRPYCVGVENPMTLSACKKLAELSVKRGSL 175
Query: 320 DDTSVMLIKLEHYI 279
DD S+++I+L++++
Sbjct: 176 DDISLIIIQLQNFL 189
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 533,235,917
Number of Sequences: 1393205
Number of extensions: 10749393
Number of successful extensions: 23929
Number of sequences better than 10.0: 457
Number of HSP's better than 10.0 without gapping: 22998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23547
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30270070164
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
