Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002009A_C02 KMC002009A_c02
(608 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_174222.2| WRKY family transcription factor; protein id: A... 69 6e-11
ref|NP_200444.1| putative protein; protein id: At5g56330.1 [Arab... 45 6e-04
dbj|BAC03887.1| unnamed protein product [Homo sapiens] 45 7e-04
ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|... 45 7e-04
dbj|BAA87194.1| Hypothetical protein [Schizosaccharomyces pombe] 45 0.001
>ref|NP_174222.2| WRKY family transcription factor; protein id: At1g29280.1,
supported by cDNA: gi_17980955 [Arabidopsis thaliana]
gi|20978789|sp|Q9LP56|WR65_ARATH Probable WRKY
transcription factor 65 (WRKY DNA-binding protein 65)
gi|25518516|pir||D86415 hypothetical protein F28N24.4 -
Arabidopsis thaliana gi|9502413|gb|AAF88112.1|AC021043_5
Hypothetical protein [Arabidopsis thaliana]
gi|17980956|gb|AAL50783.1|AF452173_1 WRKY transcription
factor 65 [Arabidopsis thaliana]
Length = 259
Score = 68.6 bits (166), Expect = 6e-11
Identities = 40/68 (58%), Positives = 44/68 (63%), Gaps = 4/68 (5%)
Frame = -1
Query: 587 NELGWLGVEMETASSAAAMLESPIMAPE----FDEADVASVFLPMREEDELLFADLGELP 420
+E W EMET SS +LESPI + E AD +VF PM EEDE LFADLGELP
Sbjct: 183 DEFAWF-TEMETTSST--ILESPIFSSEKKTAVSGADDVAVFFPMGEEDESLFADLGELP 239
Query: 419 ECSAVFRH 396
ECS VFRH
Sbjct: 240 ECSVVFRH 247
>ref|NP_200444.1| putative protein; protein id: At5g56330.1 [Arabidopsis thaliana]
gi|10177831|dbj|BAB11260.1| contains similarity to
carbonic anhydrase~gene_id:MCD7.6 [Arabidopsis thaliana]
Length = 350
Score = 45.4 bits (106), Expect = 6e-04
Identities = 26/79 (32%), Positives = 32/79 (39%)
Frame = +2
Query: 371 AAAGHPPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMT 550
A A PP TP TP P+ + P P A PTP +P+ PAP +
Sbjct: 34 APAPTPPKPKPTPAPTPPKPKPKPAPTPPKPKPAPAPTPPKPKPAPAP------TPPKPK 87
Query: 551 PSPSLLPATPARFRRPGPP 607
P P+ P P P PP
Sbjct: 88 PKPAPTPPNPKPTPAPTPP 106
Score = 43.5 bits (101), Expect = 0.002
Identities = 27/86 (31%), Positives = 33/86 (37%)
Frame = +2
Query: 350 SRTTASLAAAGHPPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSR 529
S T S A A PP P TP P+ P P PTP +P+ PAP
Sbjct: 16 SITIVSSAPAPKPPKPKPAPAPTPPKPKPTPAPTPPKPKPKPAPTPPKPKPAPAP----- 70
Query: 530 AWRQRMTPSPSLLPATPARFRRPGPP 607
+ P+P+ P P P PP
Sbjct: 71 -TPPKPKPAPAPTPPKPKPKPAPTPP 95
Score = 38.1 bits (87), Expect = 0.090
Identities = 22/68 (32%), Positives = 27/68 (39%)
Frame = +2
Query: 371 AAAGHPPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMT 550
A A PP P TP P+ + P P PTP +P+ PAP T
Sbjct: 67 APAPTPPKPKPAPAPTPPKPKPKPAPTPPNPKPTPAPTPPKPKPAPAP---------APT 117
Query: 551 PSPSLLPA 574
P+P PA
Sbjct: 118 PAPKPKPA 125
Score = 35.8 bits (81), Expect = 0.45
Identities = 27/76 (35%), Positives = 32/76 (41%), Gaps = 3/76 (3%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAPRGQR--TAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPSP 559
PP P TP P+ T +P P A PTP P+ TPAP P P
Sbjct: 61 PPKPKPAPAPTPPKPKPAPAPTPPKPKPKPA--PTPPNPKPTPAP--------TPPKPKP 110
Query: 560 SLLPA-TPARFRRPGP 604
+ PA TPA +P P
Sbjct: 111 APAPAPTPAPKPKPAP 126
>dbj|BAC03887.1| unnamed protein product [Homo sapiens]
Length = 258
Score = 45.1 bits (105), Expect = 7e-04
Identities = 30/85 (35%), Positives = 45/85 (52%)
Frame = +1
Query: 352 PHHGVASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSS 531
P +S +S+ P ++ SGSSP S+NSS SSS ++ ++S S S SS
Sbjct: 154 PSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRS------SS 207
Query: 532 MAAADDAVSISTPSHPSSFSPPRSS 606
+++ + S + S PSS SP SS
Sbjct: 208 PSSSSSSTSSPSTSSPSSSSPSSSS 232
Score = 43.5 bits (101), Expect = 0.002
Identities = 30/79 (37%), Positives = 48/79 (59%)
Frame = +1
Query: 370 SRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAADD 549
S +++ P +++ S SSP S+NSSSSSS ++ ++S+SS+S + SS ++
Sbjct: 84 SSSSSTSSPSSSSSSSSSSSPSSSNSSSSSS---SSSPSSSSSSSSSSPSSSSSSPSSSS 140
Query: 550 AVSISTPSHPSSFSPPRSS 606
+ S S+PS SS SP SS
Sbjct: 141 SSSSSSPSSSSS-SPSSSS 158
Score = 42.7 bits (99), Expect = 0.004
Identities = 28/85 (32%), Positives = 45/85 (52%)
Frame = +1
Query: 352 PHHGVASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSS 531
P +S +S +++ S SSP S++SSSSSS ++ +S+SS+S + SS
Sbjct: 92 PSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSS 151
Query: 532 MAAADDAVSISTPSHPSSFSPPRSS 606
+ + + S S+ S S S P SS
Sbjct: 152 SSPSSSSSSSSSSSSSPSSSSPSSS 176
Score = 42.0 bits (97), Expect = 0.006
Identities = 28/81 (34%), Positives = 45/81 (54%)
Frame = +1
Query: 364 VASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAA 543
+ S +S+ P ++ HS SSP S++SSSS S + +S+SS+S + SS +++
Sbjct: 55 IPSSSSSSSSP---SSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSS 111
Query: 544 DDAVSISTPSHPSSFSPPRSS 606
+ S + S SS S P SS
Sbjct: 112 SSSSSSPSSSSSSSSSSPSSS 132
Score = 41.2 bits (95), Expect = 0.011
Identities = 28/79 (35%), Positives = 46/79 (57%)
Frame = +1
Query: 370 SRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAADD 549
S +S+ P ++ HS SSP S++S+SS S ++ ++S SS++ + SS ++
Sbjct: 66 SSSHSSSSP---SSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSS 122
Query: 550 AVSISTPSHPSSFSPPRSS 606
+ S S+PS SS SP SS
Sbjct: 123 SSSSSSPSSSSS-SPSSSS 140
Score = 41.2 bits (95), Expect = 0.011
Identities = 29/81 (35%), Positives = 47/81 (57%), Gaps = 1/81 (1%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLS-SMAAA 543
+S +S+ +++ S SSP S++SS SSS ++ ++S SS+S + G S S + +
Sbjct: 126 SSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNS 185
Query: 544 DDAVSISTPSHPSSFSPPRSS 606
+ S S+PS SS PRSS
Sbjct: 186 SPSSSSSSPSSSSSSPSPRSS 206
Score = 39.3 bits (90), Expect = 0.041
Identities = 28/79 (35%), Positives = 45/79 (56%)
Frame = +1
Query: 370 SRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAADD 549
S +S+ P +++ S SS S++SSSSSS N+ ++S+SS+ + SS + +
Sbjct: 75 SSSHSSSSPSSSSSTSSPSS--SSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSS 132
Query: 550 AVSISTPSHPSSFSPPRSS 606
+ S S+ S SS SP SS
Sbjct: 133 SSSPSSSSSSSSSSPSSSS 151
Score = 38.5 bits (88), Expect = 0.069
Identities = 27/80 (33%), Positives = 45/80 (55%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S+ P +++ S SS S++S SSSS ++ ++S+SS+S S + +
Sbjct: 120 SSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSS 179
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S+PS SS SP SS
Sbjct: 180 PSSSNSSPSSSSS-SPSSSS 198
Score = 38.1 bits (87), Expect = 0.090
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S+ ++ S SSP S++SSSSSS ++ + S+S +S + S +++
Sbjct: 133 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSS 192
Query: 547 DAVSISTPSHPSSFSPPRSS 606
S S+ P S SP SS
Sbjct: 193 SPSSSSSSPSPRSSSPSSSS 212
Score = 37.4 bits (85), Expect = 0.15
Identities = 26/79 (32%), Positives = 43/79 (53%)
Frame = +1
Query: 370 SRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAADD 549
S +S+ ++ S SS S+ SSSSSS ++ ++S+ S+S + SS +++
Sbjct: 105 SSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSS 164
Query: 550 AVSISTPSHPSSFSPPRSS 606
+ S S+ S SS S P SS
Sbjct: 165 SSSPSSSSPSSSGSSPSSS 183
Score = 37.4 bits (85), Expect = 0.15
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S+ ++ S SSP S++SSSSSS ++ +S+SS+S + SS + +
Sbjct: 115 SSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSS----SSSSPSS 170
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S S SS S P SS
Sbjct: 171 SSPSSSGSSPSSSNSSPSSS 190
Score = 35.4 bits (80), Expect = 0.59
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S +++ S SS S+ SSSSSS + ++++SS+S + SS +++
Sbjct: 67 SSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSS 126
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S+ S SS S SS
Sbjct: 127 SSPSSSSSSPSSSSSSSSSS 146
Score = 35.0 bits (79), Expect = 0.76
Identities = 26/85 (30%), Positives = 45/85 (52%)
Frame = +1
Query: 352 PHHGVASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSS 531
P +S +S+ + + S +S S++SSSSSS +++++S+SS+S SS
Sbjct: 65 PSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSSSS 124
Query: 532 MAAADDAVSISTPSHPSSFSPPRSS 606
+++ + S S S SS S SS
Sbjct: 125 SSSSPSSSSSSPSSSSSSSSSSPSS 149
>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
blr0521 [Bradyrhizobium japonicum USDA 110]
Length = 745
Score = 45.1 bits (105), Expect = 7e-04
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTP-RQPRQTPAP*SGSRAWRQRMTPSPS 562
PP A P TP P AARP P+ TPTP P P GS A P+P+
Sbjct: 166 PPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSPAPAATPAPTPT 225
Query: 563 LLP-ATPARFRRPGP 604
P ATPA P P
Sbjct: 226 PAPTATPAPTATPAP 240
Score = 38.1 bits (87), Expect = 0.090
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAP---RGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPS 556
P A P TP AP + A PPP A PTP P PA + TP+
Sbjct: 139 PAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPT 198
Query: 557 PSLLPATPARFRRPGPP 607
P + P A RPG P
Sbjct: 199 P-VAPPPAAPTARPGSP 214
Score = 37.4 bits (85), Expect = 0.15
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Frame = +2
Query: 377 AGHPPNHAGTPRSTPAAPRGQRTAARPPPSSAE------TPTPRQPRQTPAP*SGSRAWR 538
A PP+ P A PR PPP +A P P P+Q P+P + +
Sbjct: 73 AAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQ-PSPPPAAAPQQ 131
Query: 539 QRMTPSPSLLPATPARFRRPGPP 607
TP P PA PA P PP
Sbjct: 132 HAPTPPP---PAPPAARPAPTPP 151
Score = 37.0 bits (84), Expect = 0.20
Identities = 30/86 (34%), Positives = 33/86 (37%), Gaps = 14/86 (16%)
Frame = +2
Query: 389 PNHAGTPRSTPAAPRGQRTAARPP-------PSSAETPTPRQ---PRQTPAP*SGSRAWR 538
P P STP AP R A PP P++ P P P TPAP G A
Sbjct: 234 PTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAP--GGTATP 291
Query: 539 QRMTPSPSLLP----ATPARFRRPGP 604
P P+ P ATPA P P
Sbjct: 292 PSGRPGPASTPAPGAATPAPTATPAP 317
Score = 36.2 bits (82), Expect = 0.34
Identities = 25/74 (33%), Positives = 29/74 (38%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPSPSL 565
PP A PR P AARP P P P P+Q P+P + + TP P
Sbjct: 83 PPPAAAPPRPAAPPPPPPPPAARPAPPPPPPP-PAAPKQ-PSPPPAAAPQQHAPTPPPPA 140
Query: 566 LPATPARFRRPGPP 607
PA P PP
Sbjct: 141 PPAARPAPTPPAPP 154
Score = 35.8 bits (81), Expect = 0.45
Identities = 23/74 (31%), Positives = 29/74 (39%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPSPSL 565
PP P + P A A PPP++A P P P P P P+P
Sbjct: 60 PPAAPARPAAPPPAAAPPHPPAAPPPAAA-PPRPAAPPPPPPP--------PAARPAPPP 110
Query: 566 LPATPARFRRPGPP 607
P PA ++P PP
Sbjct: 111 PPPPPAAPKQPSPP 124
Score = 34.3 bits (77), Expect = 1.3
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPSPSL 565
PP A + P P AARP P+ P P+ P P A R TP P
Sbjct: 123 PPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPP-PPPPAARPTPTPPPP- 180
Query: 566 LPATPARFRRPGP 604
PA PA P P
Sbjct: 181 PPAGPAARPTPAP 193
Score = 33.1 bits (74), Expect = 2.9
Identities = 20/51 (39%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
Frame = +2
Query: 362 ASLAAAGHP--PNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTP 508
A AAG P P AG + PAAP G + P S+A TP P + + P
Sbjct: 343 AGAPAAGTPAAPPQAGGLPARPAAPAGAAAPSTVPGSAAATPPPNRAQFAP 393
Score = 32.7 bits (73), Expect = 3.8
Identities = 25/74 (33%), Positives = 28/74 (37%)
Frame = +2
Query: 386 PPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPSPSL 565
PP A S P A Q+ A PPP P P R P P + A + P P
Sbjct: 113 PPPAAPKQPSPPPAAAPQQHAPTPPP-----PAPPAARPAPTPPAPPPAAAPQHAPPP-- 165
Query: 566 LPATPARFRRPGPP 607
P PA P PP
Sbjct: 166 -PPPPAARPTPTPP 178
Score = 32.7 bits (73), Expect = 3.8
Identities = 28/85 (32%), Positives = 32/85 (36%), Gaps = 9/85 (10%)
Frame = +2
Query: 356 TTASLAAAGHPPNHAGTPRSTPAAPRGQRT-AARPPPSSAETPTPRQP--RQTPAP*SGS 526
TT + PP+ P STPA A P P A TP P +P TP P G+
Sbjct: 281 TTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGRPGAGPTPGPQGGT 340
Query: 527 ------RAWRQRMTPSPSLLPATPA 583
A P LPA PA
Sbjct: 341 PPAGAPAAGTPAAPPQAGGLPARPA 365
Score = 32.3 bits (72), Expect = 5.0
Identities = 22/69 (31%), Positives = 25/69 (35%)
Frame = +2
Query: 401 GTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMTPSPSLLPATP 580
G P+ P P G A P +A P P AP + R P P P P
Sbjct: 46 GKPKQPPKGPPGAAPPAAPARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPP---PPPP 102
Query: 581 ARFRRPGPP 607
A RP PP
Sbjct: 103 A--ARPAPP 109
Score = 32.3 bits (72), Expect = 5.0
Identities = 26/79 (32%), Positives = 29/79 (35%)
Frame = +2
Query: 371 AAAGHPPNHAGTPRSTPAAPRGQRTAARPPPSSAETPTPRQPRQTPAP*SGSRAWRQRMT 550
A P A P + A P AA P P+ PTP P TPAP T
Sbjct: 192 APTATPTPVAPPPAAPTARPGSPAPAATPAPT----PTP-APTATPAP---------TAT 237
Query: 551 PSPSLLPATPARFRRPGPP 607
P+P P P R PP
Sbjct: 238 PAPGSTPGAPPAGRPGAPP 256
>dbj|BAA87194.1| Hypothetical protein [Schizosaccharomyces pombe]
Length = 210
Score = 44.7 bits (104), Expect = 0.001
Identities = 29/83 (34%), Positives = 49/83 (58%), Gaps = 3/83 (3%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S T+T P +++ S SS S++SSSSSS ++ ++S+SS+S + SS +++
Sbjct: 11 SSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 70
Query: 547 DAVSI---STPSHPSSFSPPRSS 606
+V I ++ SH SS S SS
Sbjct: 71 SSVPITSSTSSSHSSSSSSSSSS 93
Score = 43.5 bits (101), Expect = 0.002
Identities = 26/80 (32%), Positives = 48/80 (59%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S+ +++ S SS S++SSSSSS ++ ++S+SS+S + + ++S ++
Sbjct: 23 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSS 82
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S+ S SS S P SS
Sbjct: 83 HSSSSSSSSSSSSSSRPSSS 102
Score = 40.0 bits (92), Expect = 0.024
Identities = 26/80 (32%), Positives = 47/80 (58%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S+ +++ S SS S++SSSSSS ++ ++S+SS+S ++ SS +++
Sbjct: 24 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSH 83
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S+ S SS P SS
Sbjct: 84 SSSSSSSSSSSSSSRPSSSS 103
Score = 37.4 bits (85), Expect = 0.15
Identities = 27/80 (33%), Positives = 44/80 (54%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S+ +++ S SS S++SSSSSS + TS++S+S + SS +++
Sbjct: 36 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHS----SSSSSSS 91
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S PS SSF SS
Sbjct: 92 SSSSSSRPSSSSSFITTMSS 111
Score = 37.4 bits (85), Expect = 0.15
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S S+ T S SS S++SSSSSS ++ ++S+SS+S + SS +++
Sbjct: 4 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 63
Query: 547 DAVSISTPSHP--SSFSPPRSS 606
+ S S+ S P SS S SS
Sbjct: 64 SSSSSSSSSVPITSSTSSSHSS 85
Score = 35.4 bits (80), Expect = 0.59
Identities = 27/80 (33%), Positives = 44/80 (54%)
Frame = +1
Query: 367 ASRRRTSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAAD 546
+S +S T S SS S++SSSSSS ++ ++S+SS+S + SS +++
Sbjct: 2 SSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSS----SSSSSSSSSSSSSSSSSSSSSSSS 57
Query: 547 DAVSISTPSHPSSFSPPRSS 606
+ S S+ S SS S P +S
Sbjct: 58 SSSSSSSSSSSSSSSVPITS 77
Score = 34.3 bits (77), Expect = 1.3
Identities = 22/70 (31%), Positives = 40/70 (56%)
Frame = +1
Query: 382 TSTKPCRNTAEHSGSSPRSANSSSSSSLIGRNTDATSASSNSGAMIGLSSMAAADDAVSI 561
TS+ + + S ++ S +SSSSSS ++ ++S+SS+S + SS +++ + S
Sbjct: 1 TSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 60
Query: 562 STPSHPSSFS 591
S+ S SS S
Sbjct: 61 SSSSSSSSSS 70
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 579,780,535
Number of Sequences: 1393205
Number of extensions: 14653118
Number of successful extensions: 121254
Number of sequences better than 10.0: 1757
Number of HSP's better than 10.0 without gapping: 72807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 102465
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
